Volumetric medical image segmentation through dual self-distillation in U-shaped networks.

IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL
Soumyanil Banerjee, Nicholas Summerfield, Ming Dong, Carri Glide-Hurst
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Abstract

U-shaped networks and its variants have demonstrated exceptional results for medical image segmentation. In this paper, we propose a novel dual self-distillation (DSD) framework in U-shaped networks for volumetric medical image segmentation. DSD distills knowledge from the ground-truth segmentation labels to the decoder layers. Additionally, DSD also distills knowledge from the deepest decoder and encoder layer to the shallower decoder and encoder layers respectively of a single U-shaped network. DSD is a general training strategy that could be attached to the backbone architecture of any U-shaped network to further improve its segmentation performance. We attached DSD on several state-of-the-art U-shaped backbones, and extensive experiments on various public 3D medical image segmentation datasets (cardiac substructure, brain tumor and Hippocampus) demonstrated significant improvement over the same backbones without DSD. On average, after attaching DSD to the U-shaped backbones, we observed an increase of 2.82%, 4.53% and 1.3% in Dice similarity score, a decrease of 7.15 mm, 6.48 mm and 0.76 mm in the Hausdorff distance, for cardiac substructure, brain tumor and Hippocampus segmentation, respectively. These improvements were achieved with negligible increase in the number of trainable parameters and training time. Our proposed DSD framework also led to significant qualitative improvements for cardiac substructure, brain tumor and Hippocampus segmentation over the U-shaped backbones. The source code is publicly available at https://github.com/soumbane/DualSelfDistillation.

基于u型网络的双自蒸馏体积医学图像分割。
u型网络及其变体在医学图像分割中表现出优异的效果。在本文中,我们提出了一种新的双自蒸馏(DSD)框架,用于u形网络的体积医学图像分割。DSD从真值分割标签中提取知识到解码器层。此外,DSD还将知识从最深的解码器层和编码器层分别提取到单个u形网络的较浅的解码器层和编码器层。DSD是一种通用的训练策略,可以附加到任何u型网络的骨干架构上,以进一步提高其分割性能。我们在几个最先进的u型骨干上附加了DSD,并在各种公开的3D医学图像分割数据集(心脏亚结构、脑肿瘤和海马)上进行了大量实验,结果表明,与没有DSD的相同骨干相比,DSD有显著改善。我们发现,在u型骨干上附着DSD后,心脏亚结构、脑肿瘤和海马分割的Dice相似度评分平均分别增加了2.82%、4.53%和1.3%,Hausdorff距离平均分别减少了7.15 mm、6.48 mm和0.76 mm。这些改进在可训练参数数量和训练时间上的增加可以忽略不计。我们提出的DSD框架也显著改善了心脏亚结构、脑肿瘤和海马在u型骨干上的分割。源代码可在https://github.com/soumbane/DualSelfDistillation上公开获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
IEEE Transactions on Biomedical Engineering
IEEE Transactions on Biomedical Engineering 工程技术-工程:生物医学
CiteScore
9.40
自引率
4.30%
发文量
880
审稿时长
2.5 months
期刊介绍: IEEE Transactions on Biomedical Engineering contains basic and applied papers dealing with biomedical engineering. Papers range from engineering development in methods and techniques with biomedical applications to experimental and clinical investigations with engineering contributions.
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