A Neighbor-Sensitive Multi-Modal Flexible Learning Framework for Improved Prostate Tumor Segmentation in Anisotropic MR Images.

IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL
Runqi Meng, Jingli Chen, Kaicong Sun, Qianqian Chen, Xiao Zhang, Ling Dai, Yuning Gu, Guangyu Wu, Dinggang Shen
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引用次数: 0

Abstract

Accurate segmentation of prostate tumors from multi-modal magnetic resonance (MR) images is crucial for the diagnosis and treatment of prostate cancer. However, the robustness of existing segmentation methods is limited, mainly because these methods 1) fail to flexibly assess subject-specific information of each MR modality and integrate modality-specific information for accurate tumor delineation, and 2) lack effective utilization of inter-slice information across thick slices in MR images to segment the tumor as a whole 3D volume. In this work, we propose a neighbor-sensitive multi-modal flexible learning network (NesMFle) for accurate prostate tumor segmentation from multi-modal anisotropic MR images. Specifically, we perform multi-modal fusion for each slice by developing a Modality-informativeness Flexible Learning (MFLe) module for selecting and flexibly fusing informative representations of each modality based on inter-modality correlation in a pre-trained manner. After that, we exploit inter-slice feature correlation to derive volumetric tumor segmentation. In particular, we first use a Unet variant equipped with a Sequence Layer, which can coarsely capture slice relationship using 3D convolution and an attention mechanism. Then, we introduce an Activation Mapping Guidance (AMG) module to refine slice-wise representations using information from adjacent slices, ensuring consistent tumor segmentation across neighboring slices based on slice quality assessment on activation maps. Besides, during the network training, we further apply a random mask strategy to each MR modality for improving feature representation efficiency. Experiments on both in-house and public (PICAI) multi-modal prostate tumor datasets demonstrate that our proposed NesMFLe achieves competitive performance compared to state-of-the-art methods.

基于邻域敏感多模态灵活学习框架的前列腺肿瘤各向异性分割。
从多模态磁共振(MR)图像中准确分割前列腺肿瘤对于前列腺癌的诊断和治疗至关重要。然而,现有分割方法的鲁棒性有限,主要原因是:1)无法灵活评估各MR模态的主体特异性信息,并整合模态特异性信息以准确描绘肿瘤;2)缺乏有效利用MR图像中厚切片间的层间信息,将肿瘤作为一个整体三维体分割。在这项工作中,我们提出了一个邻居敏感的多模态灵活学习网络(NesMFle),用于从多模态各向异性MR图像中准确分割前列腺肿瘤。具体来说,我们通过开发模态-信息灵活学习(MFLe)模块对每个切片进行多模态融合,该模块以预训练的方式基于模态间相关性选择和灵活融合每个模态的信息表示。然后,我们利用层间特征相关性来实现体积肿瘤分割。特别是,我们首先使用配备序列层的Unet变体,它可以使用3D卷积和注意机制粗略地捕获切片关系。然后,我们引入了一个激活映射指导(AMG)模块,利用相邻切片的信息来细化切片表示,确保基于激活图的切片质量评估的相邻切片之间的肿瘤分割一致。此外,在网络训练过程中,我们进一步对每个MR模态采用随机掩码策略,以提高特征表示效率。在内部和公共(PICAI)多模态前列腺肿瘤数据集上的实验表明,与最先进的方法相比,我们提出的NesMFLe具有竞争力的性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
IEEE Transactions on Biomedical Engineering
IEEE Transactions on Biomedical Engineering 工程技术-工程:生物医学
CiteScore
9.40
自引率
4.30%
发文量
880
审稿时长
2.5 months
期刊介绍: IEEE Transactions on Biomedical Engineering contains basic and applied papers dealing with biomedical engineering. Papers range from engineering development in methods and techniques with biomedical applications to experimental and clinical investigations with engineering contributions.
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