A network pharmacology-based approach to decipher the pharmacological mechanisms of Salvia officinalis in neurodegenerative disorders.

IF 3.5 3区 医学 Q2 ENDOCRINOLOGY & METABOLISM
Sheikh Sana Nazir, Divya Goel, Divya Vohora
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引用次数: 0

Abstract

The present study aimed to assess the pharmacological mechanism of Salvia officinalis in Neurodegenerative disorders using a network pharmacology approach followed by molecular docking analysis. Phytoconstituents of S.officinalis were obtained from various databases, followed by the screening of active ingredients using the Swiss ADME web tool. Potential targets of active ingredients were identified using PubChem & SwissTargetPrediction. Genes related to Alzheimer's disease (AD), Parkinson's disease (PD), and Huntington's disease (HD) were gathered using online databases. Besides, the correlation between active ingredient targets and disease-associated genes was linked. Networks were constructed, visualized, and analyzed using Cytoscape. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genome (KEGG) pathway enrichment analysis were performed using DAVID database. Decisively, Autodock was used for molecular docking. The results of network analysis identified 9 key active ingredients based on topological analysis of the active ingredient-candidate targets network. Also, the analysis revealed a shared target of 9 key active ingredients of S. officinalis that interacted with 133 AD-related targets whereas only 6 active ingredients interacted with 85 and 58 targets of PD and HD respectively. The core genes from the network were AKT1, BACE1, CASP3, MAPK1, TNF, and IL6. Furthermore, GO and KEGG enrichment analysis showed that FOXO, TNF, MAPK, PI3K-Akt, Rap 1, and neurotrophin signalling pathways as enriched, which were further evaluated by molecular docking suggesting the protective role of S. officinalis in neurodegenerative diseases. Our research reveals the therapeutic benefits of S. officinalis, which might play a crucial role in modulating neurodegenerative diseases.

基于网络药理学的丹参治疗神经退行性疾病的药理机制研究。
本研究旨在通过网络药理学方法和分子对接分析,探讨丹参对神经退行性疾病的药理作用机制。从不同的数据库中获得了officinalis的植物成分,然后使用瑞士ADME网络工具筛选有效成分。利用PubChem和SwissTargetPrediction确定活性成分的潜在靶点。通过在线数据库收集与阿尔茨海默病(AD)、帕金森病(PD)和亨廷顿病(HD)相关的基因。此外,还发现了活性成分靶点与疾病相关基因之间的相关性。使用Cytoscape构建、可视化和分析网络。使用DAVID数据库进行基因本体(GO)和京都基因与基因组百科全书(KEGG)途径富集分析。果断地,Autodock被用于分子对接。网络分析结果基于对活性成分-候选靶点网络的拓扑分析,确定了9个关键活性成分。此外,分析还发现,山茱萸的9个关键活性成分与133个ad相关靶点相互作用,而只有6个活性成分分别与PD和HD的85个和58个靶点相互作用。网络中的核心基因为AKT1、BACE1、CASP3、MAPK1、TNF和IL6。此外,GO和KEGG富集分析显示FOXO、TNF、MAPK、PI3K-Akt、Rap 1和神经营养因子信号通路富集,进一步通过分子对接评估,提示officinalis在神经退行性疾病中的保护作用。我们的研究揭示了山茱萸的治疗益处,它可能在调节神经退行性疾病中发挥关键作用。
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来源期刊
Metabolic brain disease
Metabolic brain disease 医学-内分泌学与代谢
CiteScore
5.90
自引率
5.60%
发文量
248
审稿时长
6-12 weeks
期刊介绍: Metabolic Brain Disease serves as a forum for the publication of outstanding basic and clinical papers on all metabolic brain disease, including both human and animal studies. The journal publishes papers on the fundamental pathogenesis of these disorders and on related experimental and clinical techniques and methodologies. Metabolic Brain Disease is directed to physicians, neuroscientists, internists, psychiatrists, neurologists, pathologists, and others involved in the research and treatment of a broad range of metabolic brain disorders.
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