De novo somatic mosaicisms of INF2 and TRPV4 in patients with Charcot-Marie-Tooth disease.

IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ah Jin Lee, Sumaira Kanwal, Manisha Awasthi, Byung-Ok Choi, Ki Wha Chung
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引用次数: 0

Abstract

Background: Somatic mosaicism is caused by a postzygotic de novo mutation. It is a very rare genetic event, and mosaic cases have been reported only very limitedly among Korean patients with peripheral neuropathies, including Charcot-Marie-Tooth disease (CMT) so far.

Objective: This study was performed to identify and characterize somatic mosaicism in Korean families with CMT.

Methods: Genetic causes were identified by whole exome sequencing (WES) and a subsequent filtering process of the variants. The level of mosaicism for the de novo somatic mutations was determined by counting altered sequences from approximately 100 colonies/mutation and the ratio of altered sequences per total reads at the mutation site using the WES data.

Results: We observed two cases of somatic mosaicism in different families with CMT: p.Cys104Tyr in INF2 (male with CMT1) and p.Ser729Arg in TRPV4 (female with CMT2). The approximate levels of mosaicism were determined to be 24% and 30% in the blood, respectively. A man with the INF2 mutation showed very mild symptoms, while a woman with the TRPV4 mutation showed severe clinical phenotypes. The INF2 mutation is specifically considered a case of gonadal mosaicism. In addition, we confirmed that the p.Cys104Tyr in INF2 is associated with the CMT1 phenotype without focal segmental glomerulosclerosis (FSGS).

Conclusion: This study may be the first or second report for the INF2 and TRPV4 mosaicism. The degrees of the phenotypic severity for the mosaic mutations probably depend on the mutation sites and the levels of mosaicism in the affected tissues. This study suggests that somatic mosaicism may contribute to inter- or intra-familial phenotypic heterogeneity.

Charcot-Marie-Tooth病患者中INF2和TRPV4的新生体细胞嵌合。
背景:体细胞嵌合体是由受精卵后的新生突变引起的。这是一种非常罕见的遗传事件,到目前为止,在韩国周围神经病变患者中,包括腓骨肌萎缩症(CMT)患者中,马赛克病例的报道非常有限。目的:本研究鉴定和表征韩国CMT家族的体细胞嵌合现象。方法:通过全外显子组测序(WES)和随后的变异过滤过程确定遗传原因。通过计算来自大约100个菌落/突变的改变序列,以及使用WES数据计算突变位点上每总读取的改变序列的比率,来确定新生体细胞突变的嵌合水平。结果:我们在不同的CMT家族中观察到两例体细胞嵌合:INF2中的p.Cys104Tyr(男性具有CMT1)和TRPV4中的p.s 729arg(女性具有CMT2)。血液中嵌合的大致水平分别为24%和30%。一名患有INF2突变的男性表现出非常轻微的症状,而一名患有TRPV4突变的女性表现出严重的临床表型。INF2突变被特别认为是性腺嵌合体的一种情况。此外,我们证实了INF2中的p.Cys104Tyr与CMT1表型相关,没有局灶节段性肾小球硬化(FSGS)。结论:本研究可能是关于INF2和TRPV4嵌合的第一篇或第二篇报道。嵌合突变的表型严重程度可能取决于突变位点和受影响组织中的嵌合水平。该研究表明,体细胞嵌合可能有助于家族间或家族内表型异质性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Genes & genomics
Genes & genomics 生物-生化与分子生物学
CiteScore
3.70
自引率
4.80%
发文量
131
审稿时长
6-12 weeks
期刊介绍: Genes & Genomics is an official journal of the Korean Genetics Society (http://kgenetics.or.kr/). Although it is an official publication of the Genetics Society of Korea, membership of the Society is not required for contributors. It is a peer-reviewed international journal publishing print (ISSN 1976-9571) and online version (E-ISSN 2092-9293). It covers all disciplines of genetics and genomics from prokaryotes to eukaryotes from fundamental heredity to molecular aspects. The articles can be reviews, research articles, and short communications.
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