Transfer learning‑based attenuation correction in 99mTc-TRODAT-1 SPECT for Parkinson's disease using realistic simulation and clinical data.

IF 3 2区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Wenbo Huang, Han Jiang, Yu Du, Haiyan Wang, Hao Sun, Guang-Uei Hung, Greta S P Mok
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引用次数: 0

Abstract

Purpose: Dopamine transporter (DAT) SPECT is an effective tool for early Parkinson's disease (PD) detection and heavily hampered by attenuation. Attenuation correction (AC) is the most important correction among other corrections. Transfer learning (TL) with fine-tuning (FT) a pre-trained model has shown potential in enhancing deep learning (DL)-based AC methods. In this study, we investigate leveraging realistic Monte Carlo (MC) simulation data to create a pre-trained model for TL-based AC (TLAC) to improve AC performance for DAT SPECT.

Methods: A total number of 200 digital brain phantoms with realistic 99mTc-TRODAT-1 distribution was used to generate realistic noisy SPECT projections using MC SIMIND program and an analytical projector. One hundred real clinical 99mTc-TRODAT-1 brain SPECT data were also retrospectively analyzed. All projections were reconstructed with and without CT-based attenuation correction (CTAC/NAC). A 3D conditional generative adversarial network (cGAN) was pre-trained using 200 pairs of simulated NAC and CTAC SPECT data. Subsequently, 8, 24, and 80 pairs of clinical NAC and CTAC DAT SPECT data were employed to fine-tune the pre-trained U-Net generator of cGAN (TLAC-MC). Comparisons were made against without FT (DLAC-MC), training on purely limited clinical data (DLAC-CLI), clinical data with data augmentation (DLAC-AUG), mixed MC and clinical data (DLAC-MIX), TL using analytical simulation data (TLAC-ANA), and Chang's AC (ChangAC). All datasets used for DL-based methods were split to 7/8 for training and 1/8 for validation, and a 1-/2-/5-fold cross-validation were applied to test all 100 clinical datasets, depending on the numbers of clinical data used in the training model.

Results: With 8 available clinical datasets, TLAC-MC achieved the best result in Normalized Mean Squared Error (NMSE) and Structural Similarity Index Measure (SSIM) (TLAC-MC; NMSE = 0.0143 ± 0.0082/SSIM = 0.9355 ± 0.0203), followed by DLAC-AUG, DLAC-MIX, TLAC-ANA, DLAC-CLI, DLAC-MC, ChangAC and NAC. Similar trends exist when increasing the number of clinical datasets. For TL-based AC methods, the fewer clinical datasets available for FT, the greater the improvement as compared to DLAC-CLI using the same number of clinical datasets for training. Joint histograms analysis and Bland-Altman plots of SBR results also demonstrate consistent findings.

Conclusion: TLAC is feasible for DAT SPECT with a pre-trained model generated purely based on simulation data. TLAC-MC demonstrates superior performance over other DL-based AC methods, particularly when limited clinical datasets are available. The closer the pre-training data is to the target domain, the better the performance of the TLAC model.

基于迁移学习的帕金森病99mTc-TRODAT-1 SPECT衰减校正使用真实模拟和临床数据。
目的:多巴胺转运体(DAT) SPECT是早期帕金森病(PD)检测的有效工具,但严重受到衰减的阻碍。在各种校正中,衰减校正(AC)是最重要的。带有微调(FT)的迁移学习(TL)是一种预训练模型,在增强基于深度学习(DL)的交流方法方面显示出潜力。在本研究中,我们研究了利用现实蒙特卡罗(MC)模拟数据为基于tl的AC (TLAC)创建预训练模型,以提高数据SPECT的AC性能。方法:采用MC SIMIND程序和分析投影仪,对200张真实99mTc-TRODAT-1分布的数字脑影进行模拟,生成真实的带噪SPECT投影。对100例临床99mTc-TRODAT-1脑SPECT数据进行回顾性分析。所有投影在有和没有基于ct的衰减校正(CTAC/NAC)的情况下重建。利用200对模拟的NAC和CTAC SPECT数据对三维条件生成对抗网络(cGAN)进行了预训练。随后,使用8对、24对和80对临床NAC和CTAC数据SPECT数据对预训练的cGAN U-Net发生器(TLAC-MC)进行微调。与无FT (dlacc -MC)、纯有限临床数据训练(dlacc - cli)、数据增强临床数据训练(dlacc - aug)、混合MC和临床数据训练(dlacc - mix)、分析模拟数据训练(tlacc - ana)和Chang’s AC (ChangAC)进行比较。基于dl的方法使用的所有数据集被分成7/8用于训练和1/8用于验证,并根据训练模型中使用的临床数据的数量,应用1-/2-/5倍交叉验证来测试所有100个临床数据集。结果:在8个临床数据集中,tlc - mc在归一化均方误差(NMSE)和结构相似指数测量(SSIM) (tlc - mc;NMSE = 0.0143±0.0082/SSIM = 0.9355±0.0203),其次为dlacc - aug、dlacc - mix、dlacc - ana、dlacc - cli、dlacc - mc、ChangAC和NAC。当增加临床数据集的数量时,也存在类似的趋势。对于基于tl的AC方法,可用于FT的临床数据集越少,与使用相同数量的临床数据集进行训练的placc - cli相比,改进越大。SBR结果的联合直方图分析和Bland-Altman图也显示了一致的发现。结论:单纯基于仿真数据生成的预训练模型,TLAC用于数据SPECT是可行的。TLAC-MC表现出优于其他基于dl的AC方法的性能,特别是在有限的临床数据集可用时。预训练数据越接近目标域,TLAC模型的性能越好。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
EJNMMI Physics
EJNMMI Physics Physics and Astronomy-Radiation
CiteScore
6.70
自引率
10.00%
发文量
78
审稿时长
13 weeks
期刊介绍: EJNMMI Physics is an international platform for scientists, users and adopters of nuclear medicine with a particular interest in physics matters. As a companion journal to the European Journal of Nuclear Medicine and Molecular Imaging, this journal has a multi-disciplinary approach and welcomes original materials and studies with a focus on applied physics and mathematics as well as imaging systems engineering and prototyping in nuclear medicine. This includes physics-driven approaches or algorithms supported by physics that foster early clinical adoption of nuclear medicine imaging and therapy.
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