NRF1-Induced lncRNA DDX11-AS1 Contributes to the Progression of Hepatocellular Carcinoma via Activating CA9 Expression and the MEK/ERK Pathway.

IF 4.2 3区 医学 Q2 ONCOLOGY
Journal of Hepatocellular Carcinoma Pub Date : 2025-05-07 eCollection Date: 2025-01-01 DOI:10.2147/JHC.S516656
Yingnan Li, Mengjiao Shi, Beibei Bie, Hongwei Tian, Jun Li, Zongfang Li, Jin Sun
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引用次数: 0

Abstract

Purpose: DDX11 antisense RNA 1 (DDX11-AS1) has been recognized for its strong correlation with hepatocellular carcinoma (HCC). Nevertheless, the exact biological functions and fundamental molecular processes of DDX11-AS1 in HCC require further in-depth investigation.

Methods: A comprehensive bioinformatics analysis was carried out to explore the expression of DDX11-AS1 and its clinical implication in HCC utilizing the TCGA data. qRT-PCR was employed to validate the expression of DDX11-AS1 in HCC tissues/cell lines. RNA fluorescence in situ hybridization (RNA-FISH) was used to observe the subcellular localization of DDX11-AS1 in HCC cells. Loss-of-function experiments, both in vitro and in vivo, were executed to elucidate the biological functions of DDX11-AS1 in HCC. RNA sequencing (RNA-seq) was employed to identify genes and signaling pathways potentially regulated by DDX11-AS1. Rescue experiments were conducted to validate that carbonic anhydrase IX (CA9) mediates DDX11-AS1 promoting HCC progression. The influence of nuclear respiratory factor 1 (NRF1) on the transcription of DDX11-AS1 was investigated through dual-luciferase reporter assays and ChIP-qPCR.

Results: The increased expression of DDX11-AS1 is positively associated with several aggressive clinical characteristics (pathologic T stage, histologic grade, AFP level, and vascular invasion), and is closely linked to unfavorable outcomes in HCC patients, acting as a separate hazardous factor for overall survival. DDX11-AS1 is predominantly situated in the nucleus of HCC cells. DDX11-AS1 knockdown impeded the growth, migration, and invasion capabilities of HCC cells in vitro, and reduced the tumor enlargement in a subcutaneous mouse model. RNA-Seq unveiled that silencing DDX11-AS1 lessened the expression of CA9 and suppressed the activity of the MEK/ERK signaling cascade in HCC cells. Rescue experiments uncovered that CA9 acts as a downstream target facilitating the cancer-causing roles of DDX11-AS1 in HCC. Furthermore, DDX11-AS1 was revealed to be transcriptionally regulated by NRF1.

Conclusion: DDX11-AS1, a NRF1-induced lncRNA, facilitates HCC development by upregulating CA9 expression and activating the MEK/ERK signaling cascade.

nrf1诱导的lncRNA DDX11-AS1通过激活CA9表达和MEK/ERK通路参与肝癌的进展
目的:DDX11反义RNA 1 (DDX11- as1)与肝细胞癌(HCC)密切相关。然而,DDX11-AS1在HCC中的确切生物学功能和基本分子过程需要进一步深入研究。方法:利用TCGA数据进行综合生物信息学分析,探讨DDX11-AS1在HCC中的表达及其临床意义。采用qRT-PCR验证DDX11-AS1在HCC组织/细胞系中的表达。采用RNA荧光原位杂交技术(RNA- fish)观察DDX11-AS1在HCC细胞中的亚细胞定位。通过体外和体内功能丧失实验,阐明DDX11-AS1在HCC中的生物学功能。采用RNA测序(RNA-seq)技术鉴定DDX11-AS1可能调控的基因和信号通路。通过救援实验验证碳酸酐酶IX (CA9)介导DDX11-AS1促进HCC进展。通过双荧光素酶报告基因检测和ChIP-qPCR研究核呼吸因子1 (NRF1)对DDX11-AS1转录的影响。结果:DDX11-AS1表达升高与若干侵袭性临床特征(病理T分期、组织学分级、AFP水平和血管侵犯)呈正相关,与HCC患者的不良结局密切相关,是影响总生存的单独危险因素。DDX11-AS1主要位于HCC细胞的细胞核中。在体外实验中,DDX11-AS1敲低抑制了HCC细胞的生长、迁移和侵袭能力,并减少了小鼠皮下模型中肿瘤的扩大。RNA-Seq揭示,沉默DDX11-AS1可降低HCC细胞中CA9的表达并抑制MEK/ERK信号级联的活性。救援实验发现CA9作为下游靶点促进DDX11-AS1在HCC中的致癌作用。此外,DDX11-AS1被发现受NRF1的转录调控。结论:nrf1诱导的lncRNA DDX11-AS1通过上调CA9表达和激活MEK/ERK信号级联促进HCC的发展。
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来源期刊
CiteScore
0.50
自引率
2.40%
发文量
108
审稿时长
16 weeks
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