Crystal structures of the putative endoribonuclease L-PSP from Entamoeba histolytica

IF 1.1 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
Oladele T. Ojuromi, Abdulazeez O. Giwa, Anna Gardberg, Sandhya Subramanian, Peter J. Myler, Jan Abendroth, Bart Staker, Oluwatoyin A. Asojo
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引用次数: 0

Abstract

Entamoeba histolytica causes amebiasis, a neglected disease that kills ∼100 000 people globally each year. Due to emerging drug resistance, E. histolytica is one of the target organisms for structure-based drug discovery by the Seattle Structural Genomics Center for Infectious Disease (SSGCID). Purification, crystallization and three structures of the putative drug target endoribonuclease L-PSP from E. histolytica (EhL-PSP) are presented. EhL-PSP has a two-layer α/β-sandwich with structural homology to endoribonuclease L-PSP. All three structures reveal the prototypical YjgF/YER057c/UK114 family trimer topology with accessible allosteric active sites. Citrate molecules from the crystallization solution are bound to the allosteric site in two of the three reported structures. The large allosteric site of EhL-PSP is well conserved with bacterial YjgF/YER057c/UK114 family members and could be targeted for inhibition, drug discovery or repurposing.

Abstract Image

溶组织内阿米巴核糖核酸内切酶L-PSP的晶体结构。
溶组织内阿米巴原虫引起阿米巴病,这是一种被忽视的疾病,每年在全球造成约10万人死亡。由于新出现的耐药性,溶组织芽胞杆菌是西雅图传染病结构基因组学中心(SSGCID)基于结构的药物发现的目标生物之一。本文报道了溶组织芽孢杆菌(EhL-PSP)中核糖核酸内切酶L-PSP的纯化、结晶和三种结构。EhL-PSP具有两层α/β-夹层结构,与核糖核酸内切酶L-PSP具有同源性。这三种结构都具有典型的YjgF/YER057c/UK114家族三聚体拓扑结构,具有可接近的变构活性位点。结晶溶液中的柠檬酸盐分子在三种结构中的两种结构中与变构位点结合。EhL-PSP的大变构位点在细菌YjgF/YER057c/UK114家族成员中具有良好的保守性,可以作为抑制、药物开发或再利用的靶点。
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来源期刊
Acta crystallographica. Section F, Structural biology communications
Acta crystallographica. Section F, Structural biology communications BIOCHEMICAL RESEARCH METHODSBIOCHEMISTRY &-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.90
自引率
0.00%
发文量
95
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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