Application of network pharmacology, bioinformatics, computational molecular docking, and experimental validation to study the anticancer effects of oleanolic acid in oral squamous carcinoma cells.

IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY
Acta Pharmaceutica Pub Date : 2025-04-10 Print Date: 2025-03-01 DOI:10.2478/acph-2025-0005
Ting Yin, Hao Wang, Yaqin Zou
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引用次数: 0

Abstract

Oleanolic acid (OA) has demonstrated anticancer effects across various cancers, with some derivatives advancing to clinical trials. Howe ver, its precise mechanisms of action remain unclear, especially in oral squamous cell carcinoma (OSCC). This study employed network pharmacology, bioinformatics, molecular docking, dynamics simulations, and experimental validation to explore OA's anticancer effects in OSCC and elucidate its mechanism of action. OA's pharmacokinetic and physicochemical properties were assessed using SwissADME and Molsoft, revealing high oral bioavailability and GI absorption. SwissTargetPrediction and SuperPred identified protein targets, whereas GeneCards provided OSCC-related targets. A Venn diagram showed 34 overlapping targets between OA and OSCC. STRING and Cytoscape were used to construct a protein-protein interaction (PPI) network with 32 nodes and 164 edges, identifying HSP90AA1, STAT3, HSP90AB1, PI3KR1, and NFKB1 as key hub genes. Gene ontology and KEGG enrichment analyses highlighted relevant biological processes, molecular functions, and pathways. Molecular docking and dynamics simulations confirmed the strong binding of OA to hub targets. Experimental validation showed that OA inhibited cell viability and colony formation in a dose-dependent manner, induced apoptosis, and downregulated HSP90AA1, STAT3, and PI3KR1 proteins. In conclusion, this comprehensive study combining network pharmacology, bioinformatics, molecular simulations, and experimental assays provides valuable insights into OA's anticancer potential and detailed mechanism of action in OSCC.

应用网络药理学、生物信息学、计算分子对接、实验验证等方法研究齐墩果酸对口腔鳞癌细胞的抗癌作用。
齐墩果酸(OA)已被证明对多种癌症具有抗癌作用,一些衍生物已进入临床试验阶段。然而,其确切的作用机制尚不清楚,特别是在口腔鳞状细胞癌(OSCC)中。本研究采用网络药理学、生物信息学、分子对接、动力学模拟、实验验证等方法,探讨OA在OSCC中的抗癌作用,阐明其作用机制。使用SwissADME和Molsoft对OA的药代动力学和理化性质进行了评估,结果显示OA具有较高的口服生物利用度和胃肠道吸收。SwissTargetPrediction和SuperPred鉴定蛋白靶标,而GeneCards提供oscc相关靶标。维恩图显示OA与OSCC之间有34个重叠靶点。利用STRING和Cytoscape构建了一个包含32个节点和164条边的蛋白相互作用(PPI)网络,确定HSP90AA1、STAT3、HSP90AB1、PI3KR1和NFKB1为关键枢纽基因。基因本体和KEGG富集分析强调了相关的生物学过程、分子功能和途径。分子对接和动力学模拟证实了OA与枢纽靶点的强结合。实验验证表明,OA以剂量依赖的方式抑制细胞活力和集落形成,诱导细胞凋亡,下调HSP90AA1、STAT3和PI3KR1蛋白。综上所述,本研究结合网络药理学、生物信息学、分子模拟和实验分析,为OA在OSCC中的抗癌潜力和详细的作用机制提供了有价值的见解。
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来源期刊
Acta Pharmaceutica
Acta Pharmaceutica PHARMACOLOGY & PHARMACY-
CiteScore
5.20
自引率
3.60%
发文量
20
审稿时长
>12 weeks
期刊介绍: AP is an international, multidisciplinary journal devoted to pharmaceutical and allied sciences and contains articles predominantly on core biomedical and health subjects. The aim of AP is to increase the impact of pharmaceutical research in academia, industry and laboratories. With strong emphasis on quality and originality, AP publishes reports from the discovery of a drug up to clinical practice. Topics covered are: analytics, biochemistry, biopharmaceutics, biotechnology, cell biology, cell cultures, clinical pharmacy, drug design, drug delivery, drug disposition, drug stability, gene technology, medicine (including diagnostics and therapy), medicinal chemistry, metabolism, molecular modeling, pharmacology (clinical and animal), peptide and protein chemistry, pharmacognosy, pharmacoepidemiology, pharmacoeconomics, pharmacodynamics and pharmacokinetics, protein design, radiopharmaceuticals, and toxicology.
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