Daniel A. Osborne, Jonathan O. Deridal, Jennifer Winarta, Margaret G. Batek, Sharalyn Sentinella, Edward J. Valente
{"title":"Ring-chain Tautomerism Trends in 3-(4’-alkyl-2’-oxobut-4’-yl)-4-hydroxycoumarins: Substituent Steric Bulk Controls Solution Composition and Equilibrium Thermodynamics of Alkyl Warfarin Analogs; Structural and Computational Analysis","authors":"Daniel A. Osborne, Jonathan O. Deridal, Jennifer Winarta, Margaret G. Batek, Sharalyn Sentinella, Edward J. Valente","doi":"10.1007/s10870-025-01040-x","DOIUrl":null,"url":null,"abstract":"<div><p>As for warfarin, alkyl analogs of 3-(2’-oxo-4’-alkylbut-4’-yl)-4-hydroxycoumarins in solution display equilibria between <i>trans</i> hemiketal ⇋ open, and open ⇋ <i>cis</i> hemiketal tautomers. A steric trend is observed for the reactions by variable temperature NMR in CDCl<sub>3</sub>, with ΔG (kJ/mol, 298 K) for <i>trans</i> ⇋open, open ⇋ <i>cis</i> and alkyl substituents: methyl (+ 0.3, -0.3), <i>n</i>-pentyl (-2.6, + 3.0), isopropyl (-2.8, + 5.0), cyclohexyl (-4.3, + 7.2), neopentyl (-6.3, + 5.7) and <i>t</i>-butyl (<-13, >+13) in CDCl<sub>3</sub>. The <i>trans</i> ⇋ open reactions typically are entropically favored but decreasingly enthalpically favored with substituent size. For the open ⇋ <i>cis</i> reactions, enthalpic terms increasingly favor ring opening, while entropic contributions favoring open forms are moderated by greater conformational flexibility in the cyclic forms. Similar results were observed in d<sub>6</sub>-dmso. In the solid state, (R)-3-(2’-oxopent-4’-yl)-4-hydroxycoumarin crystallizes in the monoclinic system (<i>P</i> 2<sub>1</sub>, Z = 6) with one <i>trans</i> and two <i>cis</i> hemiketal tautomers comprising the asymmetric unit. Racemic (±)-3-(2’-oxonon-4’-yl)-4-hydroxycoumarin crystallizes in the triclinic system (<i>P</i> -1) as the <i>cis</i> (2R,4R / 2 S,4 S) hemiketals. Though the alkyl warfarins typically crystallize as their cyclic hemiketals (<i>cis</i> or <i>trans</i>) even with substituents as bulky as neopentyl, the <i>t</i>-butyl analog, racemic 3-(2’-oxo-5’,5’-dimethylhex-4’-yl)-4-hydroxycoumarin crystallizes in the monoclinic system (<i>P</i> 2<sub>1</sub>/<i>c</i>) as the open coumarin tautomer, and its solutions also contain only the open form. These structures, augmented by literature determinations of alkyl warfarins and derivatives alkyl ketals, include (2 S,4 S)-<i>trans</i>-2-ethoxy-2-methyl-3,4-dihydro-4-cyclohexyl-2 H,5 H-pyrano[3,2-c] (1)benzopyran-5-one (<i>P</i> 2<sub>1</sub>2<sub>1</sub>2<sub>1</sub>). From 23 determinations including six reported here, embedded dihydropyran ring conformations provide a structural basis for the steric interactions in the cyclic forms. Alkyl groups in <i>trans</i> isomers distort the nearby coumarin carbonyl oxygen toward the opposite side of the coumarin ring. Computations (DFT) corroborate the relative stabilities of the cyclic hemiketals with the smaller substituents, but underestimate the importance of solvent on stabilization of the open tautomers. Sterimol analysis of the ΔΔGs for the open – cyclic reactions, relative to the methyl substituent, support a general steric model for the alkyl substituent-related changes in the tautomeric equilibria.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><img></picture></div><div><p>As alkyl groups (substituted for the phenyl in warfarin) increase in bulk from methyl to <i>t</i>-butyl, solutions increasingly favor the open tautomer over the cyclic hemiketals, and “<i>t</i>-butyl warfarin” crystallizes in the open form.</p></div></div></figure></div></div>","PeriodicalId":615,"journal":{"name":"Journal of Chemical Crystallography","volume":"55 2","pages":"97 - 114"},"PeriodicalIF":0.4000,"publicationDate":"2025-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Chemical Crystallography","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s10870-025-01040-x","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CRYSTALLOGRAPHY","Score":null,"Total":0}
引用次数: 0
Abstract
As for warfarin, alkyl analogs of 3-(2’-oxo-4’-alkylbut-4’-yl)-4-hydroxycoumarins in solution display equilibria between trans hemiketal ⇋ open, and open ⇋ cis hemiketal tautomers. A steric trend is observed for the reactions by variable temperature NMR in CDCl3, with ΔG (kJ/mol, 298 K) for trans ⇋open, open ⇋ cis and alkyl substituents: methyl (+ 0.3, -0.3), n-pentyl (-2.6, + 3.0), isopropyl (-2.8, + 5.0), cyclohexyl (-4.3, + 7.2), neopentyl (-6.3, + 5.7) and t-butyl (<-13, >+13) in CDCl3. The trans ⇋ open reactions typically are entropically favored but decreasingly enthalpically favored with substituent size. For the open ⇋ cis reactions, enthalpic terms increasingly favor ring opening, while entropic contributions favoring open forms are moderated by greater conformational flexibility in the cyclic forms. Similar results were observed in d6-dmso. In the solid state, (R)-3-(2’-oxopent-4’-yl)-4-hydroxycoumarin crystallizes in the monoclinic system (P 21, Z = 6) with one trans and two cis hemiketal tautomers comprising the asymmetric unit. Racemic (±)-3-(2’-oxonon-4’-yl)-4-hydroxycoumarin crystallizes in the triclinic system (P -1) as the cis (2R,4R / 2 S,4 S) hemiketals. Though the alkyl warfarins typically crystallize as their cyclic hemiketals (cis or trans) even with substituents as bulky as neopentyl, the t-butyl analog, racemic 3-(2’-oxo-5’,5’-dimethylhex-4’-yl)-4-hydroxycoumarin crystallizes in the monoclinic system (P 21/c) as the open coumarin tautomer, and its solutions also contain only the open form. These structures, augmented by literature determinations of alkyl warfarins and derivatives alkyl ketals, include (2 S,4 S)-trans-2-ethoxy-2-methyl-3,4-dihydro-4-cyclohexyl-2 H,5 H-pyrano[3,2-c] (1)benzopyran-5-one (P 212121). From 23 determinations including six reported here, embedded dihydropyran ring conformations provide a structural basis for the steric interactions in the cyclic forms. Alkyl groups in trans isomers distort the nearby coumarin carbonyl oxygen toward the opposite side of the coumarin ring. Computations (DFT) corroborate the relative stabilities of the cyclic hemiketals with the smaller substituents, but underestimate the importance of solvent on stabilization of the open tautomers. Sterimol analysis of the ΔΔGs for the open – cyclic reactions, relative to the methyl substituent, support a general steric model for the alkyl substituent-related changes in the tautomeric equilibria.
Graphical Abstract
As alkyl groups (substituted for the phenyl in warfarin) increase in bulk from methyl to t-butyl, solutions increasingly favor the open tautomer over the cyclic hemiketals, and “t-butyl warfarin” crystallizes in the open form.
期刊介绍:
Journal of Chemical Crystallography is an international and interdisciplinary publication dedicated to the rapid dissemination of research results in the general areas of crystallography and spectroscopy. Timely research reports detail topics in crystal chemistry and physics and their relation to problems of molecular structure; structural studies of solids, liquids, gases, and solutions involving spectroscopic, spectrometric, X-ray, and electron and neutron diffraction; and theoretical studies.