XCAT 3.0: A comprehensive library of personalized digital twins derived from CT scans

IF 11.8 1区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Lavsen Dahal , Mobina Ghojoghnejad , Liesbeth Vancoillie , Dhrubajyoti Ghosh , Yubraj Bhandari , David Kim , Fong Chi Ho , Fakrul Islam Tushar , Sheng Luo , Kyle J. Lafata , Ehsan Abadi , Ehsan Samei , Joseph Y. Lo , W. Paul Segars
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Abstract

Virtual Imaging Trials (VIT) offer a cost-effective and scalable approach for evaluating medical imaging technologies. Computational phantoms, which mimic real patient anatomy and physiology, play a central role in VITs. However, the current libraries of computational phantoms face limitations, particularly in terms of sample size and heterogeneity. Insufficient representation of the population hampers accurate assessment of imaging technologies across different patient groups. Traditionally, the more realistic computational phantoms were created by manual segmentation, which is a laborious and time-consuming task, impeding the expansion of phantom libraries. This study presents a framework for creating realistic computational phantoms using a suite of automatic segmentation models and performing three forms of automated quality control on the segmented organ masks. The result is the release of over 2500 new XCAT 3 generation of computational phantoms. This new formation embodies 140 structures and represents a comprehensive approach to detailed anatomical modeling. The developed computational phantoms are formatted in both voxelized and surface mesh formats. The framework is combined with an in-house CT scanner simulator to produce realistic CT images. The framework has the potential to advance virtual imaging trials, facilitating comprehensive and reliable evaluations of medical imaging technologies. Phantoms may be requested at https://cvit.duke.edu/resources/. Code, model weights, and sample CT images are available at https://xcat-3.github.io/.
XCAT 3.0:基于CT扫描的个性化数字双胞胎综合库
虚拟成像试验(VIT)为评估医学成像技术提供了一种经济有效且可扩展的方法。模拟真实患者解剖和生理的计算幻影在vit中起着核心作用。然而,目前的计算幻影库面临着局限性,特别是在样本量和异质性方面。人口代表性不足妨碍了对不同患者群体的成像技术进行准确评估。传统上,更逼真的计算幻影是通过人工分割来创建的,这是一项费力且耗时的任务,阻碍了幻影库的扩展。本研究提出了一个使用一套自动分割模型和对分割的器官面具进行三种形式的自动质量控制来创建逼真的计算模型的框架。其结果是发布了超过2500个新的XCAT 3代计算模型。这种新的形成体现了140个结构,并代表了详细解剖建模的综合方法。所开发的计算幻影以体素化和面网格格式进行格式化。该框架与内部CT扫描仪模拟器相结合,产生逼真的CT图像。该框架有可能推进虚拟成像试验,促进对医学成像技术的全面和可靠评估。幻影可通过https://cvit.duke.edu/resources/请求。代码、模型权重和CT图像样本可在https://xcat-3.github.io/上获得。
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来源期刊
Medical image analysis
Medical image analysis 工程技术-工程:生物医学
CiteScore
22.10
自引率
6.40%
发文量
309
审稿时长
6.6 months
期刊介绍: Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.
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