Mariyam Siddiqah, Kashif Javed, Syed Omer Gilani, Muhammad Attique Khan, Shrooq Alsenan, Robertas Damaševic̆ius, Yudong Zhang
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引用次数: 0
Abstract
Transformer-based methods have shown remarkable outcomes in medical image segmentation tasks. Specifically, the Swin Transformer has proven to be an impressive approach for segmentation jobs, demonstrating its potential to further the discipline. Extensive research on integrating Swin Transformer architecture with U-Net models has shown significant progress toward improving segmentation accuracy. Currently, researchers are looking for innovative methods to improve the challenging segmentation accuracy of enhanced tumor regions due to their heterogeneous and indistinct boundaries. To improve its accuracy, we have proposed a modified version of Swin UNETR, DSA, which is deeper and more focused on extracting global features by an enhanced self-attention mechanism in the later stages of the encoder. It outperformed the enhancing tumor class with comparative performance for the other two classes. By fine-tuning some hyperparameters, we achieved SOTA performance for brain tumor segmentation. The proposed deep self-architecture obtained a mean dice score value of 0.889 and a mean Jaccard score of 0.806, respectively. A comparison was conducted with some recent state-of-the-art techniques, which showed improved accuracy and outperformed the recent best-performing UNet and transformer architectures.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.