{"title":"Contributions to the development of prediction models for the toxicity of ionic liquids","authors":"Hayet Abdellatif, Maamar Laidi, Cherif Si-moussa, Abdeltif Amrane, Imane Euldji, Widad Benmouloud","doi":"10.1007/s11224-024-02411-4","DOIUrl":null,"url":null,"abstract":"<div><p>Ionic liquids (ILs) are a class of compounds with unique properties that make them highly valuable in various industrial and chemical processes, but their toxicity poses significant challenges for widespread use. This study investigates the prediction of the toxicity of ILs through quantitative structure–toxicity relationship (QSTR) modeling using a support vector machine (SVM) model enhanced with various optimization algorithms. A dataset comprising 304 ILs with toxicity measured in the leukemia rat cell line (IPC-81) and an additional 14 external validation points was employed. The model uses 13 molecular descriptors. Three optimization algorithms were constructed and evaluated: dragonfly algorithm (DA), moth–flame optimization (MFO), and gray wolf optimizer (GWO). Among them, the DA-optimized SVM model demonstrated superior predictive performance with a correlation coefficient (<i>R</i>) of 0.9871, a coefficient of determination (<i>R</i><sup>2</sup>) of 0.9742, a root mean square error (<i>RMSE</i>) of 0.1787, and a mean squared error (<i>MSE</i>) of 0.0625. Additionally, the arithmetic residuals in K-groups analysis (ARKA) method was applied to reduce the dimensionality of the dataset and identify activity cliffs, areas where small changes in molecular structure result in significant shifts in toxicity. However, the DA-SVM model using the original 13 descriptors provided superior predictive accuracy compared to the ARKA-based model. The high predictive accuracy of the DA-optimized SVM model underscores its potential as a robust tool for QSTR modeling and for assessing the toxicity of ionic liquids.</p></div>","PeriodicalId":780,"journal":{"name":"Structural Chemistry","volume":"36 3","pages":"865 - 886"},"PeriodicalIF":2.1000,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Structural Chemistry","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s11224-024-02411-4","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Ionic liquids (ILs) are a class of compounds with unique properties that make them highly valuable in various industrial and chemical processes, but their toxicity poses significant challenges for widespread use. This study investigates the prediction of the toxicity of ILs through quantitative structure–toxicity relationship (QSTR) modeling using a support vector machine (SVM) model enhanced with various optimization algorithms. A dataset comprising 304 ILs with toxicity measured in the leukemia rat cell line (IPC-81) and an additional 14 external validation points was employed. The model uses 13 molecular descriptors. Three optimization algorithms were constructed and evaluated: dragonfly algorithm (DA), moth–flame optimization (MFO), and gray wolf optimizer (GWO). Among them, the DA-optimized SVM model demonstrated superior predictive performance with a correlation coefficient (R) of 0.9871, a coefficient of determination (R2) of 0.9742, a root mean square error (RMSE) of 0.1787, and a mean squared error (MSE) of 0.0625. Additionally, the arithmetic residuals in K-groups analysis (ARKA) method was applied to reduce the dimensionality of the dataset and identify activity cliffs, areas where small changes in molecular structure result in significant shifts in toxicity. However, the DA-SVM model using the original 13 descriptors provided superior predictive accuracy compared to the ARKA-based model. The high predictive accuracy of the DA-optimized SVM model underscores its potential as a robust tool for QSTR modeling and for assessing the toxicity of ionic liquids.
期刊介绍:
Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry.
We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.