Computational Strategies for Broad Spectrum Venom Phospholipase A2 Inhibitors.

IF 5.6 2区 化学 Q1 CHEMISTRY, MEDICINAL
David A Poole,Laura-Oana Albulescu,Jeroen Kool,Nicholas R Casewell,Daan P Geerke
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引用次数: 0

Abstract

Snakebite envenoming is a persistent cause of mortality and morbidity worldwide due to the logistical challenges and costs of current antibody-based treatments. Their persistence motivates a broad interest in the discovery of inhibitors against multispecies venom phospholipase A2 (PLA2), which are underway as an alternative or supplemental treatment to improve health outcomes. Here, we present new computational strategies for improved inhibitor classification for challenging metalloenzyme targets across many species, including both a new method to utilize existing molecular docking, and subsequent data normalization. These methods were improved to support experimental screening efforts estimating the broader efficacy of candidate PLA2 inhibitors against diverse viper and elapid venoms.
广谱毒液磷脂酶A2抑制剂的计算策略。
由于目前基于抗体的治疗的物流挑战和成本,蛇咬伤是世界范围内死亡率和发病率的持续原因。它们的持续存在激发了人们对发现多物种毒液磷脂酶A2 (PLA2)抑制剂的广泛兴趣,这些抑制剂正在作为一种替代或补充治疗来改善健康结果。在这里,我们提出了新的计算策略,用于改进跨许多物种具有挑战性的金属酶目标的抑制剂分类,包括利用现有分子对接的新方法和随后的数据归一化。这些方法得到了改进,以支持实验筛选工作,估计候选PLA2抑制剂对多种毒蛇和蛇毒的更广泛功效。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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