Bilateral deformable attention transformer for screening of high myopia using optical coherence tomography

IF 7 2区 医学 Q1 BIOLOGY
Ruoxuan Gou , Xiao Ma , Na Su , Songtao Yuan , Qiang Chen
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Abstract

Myopia is a visual impairment caused by excessive refractive power of the cornea or lens or elongation of the eyeball. Due to the various classification criteria associated with high myopia, such as spherical equivalent (SE) and axial length (AL), existing methods primarily rely on individual classification criteria for model design. In this paper, to comprehensively utilize multiple indicators, we design a multi-label classification model for high myopia. Moreover, image data play a pivotal role in studying high myopia and pathological myopia. Notable features of high myopia, including increased retinal curvature, choroidal thinning, and scleral shadowing, are observable in Optical Coherence Tomography (OCT) images of the retina. We propose a model named Bilateral Deformable Attention Transformer (BDA-Tran) for multi-label screening of high myopia in OCT data. Based on the vision transformer, we introduce a bilateral deformable attention mechanism (BDA) where the queries in self-attention are composed of both the global queries and the data-dependent queries from the left and right sides. This flexible approach allows attention to focus on relevant regions and capture more myopia-related information features, thereby concentrating attention primarily on regions related to the choroid and sclera, among other areas associated with high myopia. BDA-Tran is trained and tested on OCT images of 243 patients, achieving the accuracies of 83.1 % and 87.7 % for SE and AL, respectively. Furthermore, we visualize attention maps to provide transparent and interpretable judgments. Experimental results demonstrate that BDA-Tran outperforms existing methods in terms of effectiveness and reliability under the same experimental conditions.
双侧可变形注意力转换器用于光学相干断层扫描筛查高度近视
近视是由于角膜或晶状体屈光能力过强或眼球伸长而引起的一种视力障碍。由于与高度近视相关的各种分类标准,如球面等效(SE)和轴长(AL),现有方法主要依赖于个体分类标准进行模型设计。为了综合利用多种指标,本文设计了高度近视的多标签分类模型。此外,图像数据在研究高度近视和病理性近视中起着举足轻重的作用。在视网膜光学相干断层扫描(OCT)图像中可以观察到高度近视的显著特征,包括视网膜曲率增加、脉络膜变薄和巩膜阴影。我们提出了一个双侧可变形注意转换器(BDA-Tran)模型,用于OCT数据中高度近视的多标签筛选。在视觉转换器的基础上,引入了一种双边可变形注意机制(BDA),其中自注意查询由全局查询和来自左右两侧的数据依赖查询组成。这种灵活的方法使注意力集中在相关区域,并捕获更多与近视相关的信息特征,从而将注意力主要集中在与高度近视相关的脉络膜和巩膜相关的区域。BDA-Tran在243例患者的OCT图像上进行了训练和测试,SE和AL的准确率分别达到83.1%和87.7%。此外,我们将注意力图可视化,以提供透明和可解释的判断。实验结果表明,在相同的实验条件下,BDA-Tran算法的有效性和可靠性都优于现有方法。
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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