Tailoring Bacterial Cellulose through the CRISPR/Cas9-Mediated Gene Editing Tool in Komagataeibacter xylinus

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Longhui Huang, Yiduo Zhou, Yamiao Feng, Shiru Jia, Shujun Wang and Cheng Zhong*, 
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引用次数: 0

Abstract

Bacterial cellulose (BC) is a nanocellulose produced by bacteria, formed by glucose units linked through β-1,4 glycosidic bonds. It features a three-dimensional network structure, superior water retention capacity, high porosity, and outstanding biocompatibility, among other notable characteristics. Komagataeibacter xylinus was the predominant strain used for BC production. The CRISPR/Cas9 (clustered regularly interspaced short palindromic repeats/CRISPR associate-protein 9)-mediated gene editing tool has been applied in various species; however, its application in K. xylinus has not been reported. To facilitate metabolic pathway engineering in K. xylinus, a CRISPR/Cas9-mediated gene editing tool specific to this strain was developed, achieving a gene editing efficiency exceeding 73%. Upon application of the CRISPR/Cas9-mediated gene editing tool in K. xylinus, the strain’s ability to synthesize BC was enhanced by 23.6% (5.75 g/L), and the impact of BC synthase-correlated genes (bcsH, bcsX, bcsY, and bcsZ) on BC structure was investigated. The advancement of CRISPR/Cas9-mediated gene editing tools in K. xylinus is expected to accelerate genetic modification of this organism. This advancement has the potential to significantly improve our understanding of the genetic regulatory mechanisms that govern the structure and production of BC, thereby facilitating cost-effective synthesis of BC with tailored structural properties.

Abstract Image

细菌纤维素(BC)是一种由细菌产生的纳米纤维素,由葡萄糖单位通过β-1,4糖苷键连接而成。它具有三维网络结构、优异的保水能力、高孔隙率和出色的生物相容性等显著特点。Komagataeibacter xylinus 是用于生产 BC 的主要菌株。CRISPR/Cas9(簇状规则间距短回文重复序列/CRISPR关联蛋白9)介导的基因编辑工具已在多种物种中应用,但在姬松茸中的应用尚未见报道。为了促进木虱代谢途径工程,我们开发了一种专门针对该菌株的 CRISPR/Cas9 介导的基因编辑工具,其基因编辑效率超过 73%。应用 CRISPR/Cas9 介导的基因编辑工具后,该菌株合成 BC 的能力提高了 23.6% (5.75 g/L),并研究了 BC 合成酶相关基因(bcsH、bcsX、bcsY 和 bcsZ)对 BC 结构的影响。以CRISPR/Cas9为媒介的基因编辑工具在K. xylinus中的应用有望加速该生物的基因改造。这一进步有可能极大地提高我们对控制 BC 结构和生产的遗传调控机制的理解,从而促进具有定制结构特性的 BC 的低成本合成。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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