A radiomics approach to distinguish Progressive Supranuclear Palsy Richardson's syndrome from other phenotypes starting from MR images

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Noemi Pisani , Filomena Abate , Anna Rosa Avallone , Paolo Barone , Mario Cesarelli , Francesco Amato , Marina Picillo , Carlo Ricciardi
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引用次数: 0

Abstract

Background and objective

Progressive Supranuclear Palsy (PSP) is an uncommon neurodegenerative disorder with different clinical onset, including Richardson's syndrome (PSP-RS) and other variant phenotypes (vPSP). Recognising the clinical progression of different phenotypes would enhance the accuracy of detection and treatment of PSP. The study goal was to identify radiomic biomarkers for distinguishing PSP phenotypes extracted from T1-weighted magnetic resonance images (MRI).

Methods

Forty PSP patients (20 PSP-RS and 20 vPSP) took part in the present work. Radiomic features were collected from 21 regions of interest (ROIs) mainly from frontal cortex, supratentorial white matter, basal nuclei, brainstem, cerebellum, 3rd and 4th ventricles. After features selection, three tree-based machine learning (ML) classifiers were implemented to classify PSP phenotypes.

Results

10 out of 21 ROIs performed best about sensitivity, specificity, accuracy and area under the receiver operating characteristic curve (AUCROC). Particularly, features extracted from the pons region obtained the best accuracy (0.92) and AUCROC (0.83) values while by using the other 10 ROIs, evaluation metrics range from 0.67 to 0.83. Eight features of the Gray Level Dependence Matrix were recurrently extracted for the 10 ROIs. Furthermore, by combining these ROIs, the results exceeded 0.83 in phenotypes classification and the selected areas were brain stem, pons, occipital white matter, precentral gyrus and thalamus regions.

Conclusions

Based on the achieved results, our proposed approach could represent a promising tool for distinguishing PSP-RS from vPSP.

Abstract Image

放射组学方法从MR图像开始区分进行性核上性麻痹理查森综合征与其他表型
背景与目的进行性核上性麻痹(PSP)是一种少见的神经退行性疾病,临床发病不同,包括理查德森综合征(PSP- rs)和其他变异表型(vPSP)。认识不同表型的临床进展将提高PSP的检测和治疗的准确性。研究目的是鉴定从t1加权磁共振图像(MRI)中提取的区分PSP表型的放射组学生物标志物。方法选取40例PSP患者,其中PSP- rs型患者20例,vPSP型患者20例。采集21个感兴趣区(roi)的放射学特征,主要来自额叶皮质、幕上白质、基底核、脑干、小脑、第3和第4脑室。在特征选择之后,使用三个基于树的机器学习(ML)分类器对PSP表型进行分类。结果21个roi中有10个在灵敏度、特异度、准确度和受试者工作特征曲线下面积(AUCROC)方面表现最佳。其中,从桥脑桥区域提取的特征获得了最好的准确率(0.92)和AUCROC(0.83)值,而使用其他10个roi的评价指标范围为0.67 ~ 0.83。对10个roi递归提取8个特征的灰度依赖矩阵。此外,综合这些roi,结果表型分类超过0.83,选择的区域是脑干、脑桥、枕白质、中央前回和丘脑区域。结论基于所取得的结果,我们提出的方法可以作为一种很有前途的区分PSP-RS和vPSP的工具。
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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