Multispectral Imaging Flow Cytometry for Spatio-Temporal Pollen Trait Variation Measurements of Insect-Pollinated Plants

IF 2.5 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS
Franziska Walther, Martin Hofmann, Demetra Rakosy, Carolin Plos, Till J. Deilmann, Annalena Lenk, Christine Römermann, W. Stanley Harpole, Thomas Hornick, Susanne Dunker
{"title":"Multispectral Imaging Flow Cytometry for Spatio-Temporal Pollen Trait Variation Measurements of Insect-Pollinated Plants","authors":"Franziska Walther,&nbsp;Martin Hofmann,&nbsp;Demetra Rakosy,&nbsp;Carolin Plos,&nbsp;Till J. Deilmann,&nbsp;Annalena Lenk,&nbsp;Christine Römermann,&nbsp;W. Stanley Harpole,&nbsp;Thomas Hornick,&nbsp;Susanne Dunker","doi":"10.1002/cyto.a.24932","DOIUrl":null,"url":null,"abstract":"<p>Artificial intelligence (AI) surpasses human accuracy in identifying ordinary objects, but it is still challenging for AI to be competitive in pollen grain identification. One reason for this gap is the extensive trait variation in pollen grains. In classical textbooks, pollen size relies on only 25–50 pollen grains, mostly for one plant and site. Lack of variation in pollen databases can cause limited application of machine learning approaches to real-world samples. Therefore, our study aims to investigate sources of spatial and temporal pollen trait variation for pollen morphology and fluorescence. For this purpose, 64,001 pollen grains from the four herbaceous and insect-pollinated plant species <i>Achillea millefolium</i> L., <i>Lamium album</i> L., <i>Lathyrus vernus</i> (L.) Bernh., and <i>Lotus corniculatus</i> L. sampled across four years and seven locations across Central Germany were measured using multispectral imaging flow cytometry. Observed trait variations were very species-specific; however, for most species, significant differences in spatial as well as temporal variation were found for at least one pollen trait. We could also show that this variability and the identity of a particular sample influence the accuracy of AI classifications and that multiple measurements of different origins provide the most robust AI-based identifications.</p>","PeriodicalId":11068,"journal":{"name":"Cytometry Part A","volume":"107 5","pages":"293-308"},"PeriodicalIF":2.5000,"publicationDate":"2025-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cyto.a.24932","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Cytometry Part A","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cyto.a.24932","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

Abstract

Artificial intelligence (AI) surpasses human accuracy in identifying ordinary objects, but it is still challenging for AI to be competitive in pollen grain identification. One reason for this gap is the extensive trait variation in pollen grains. In classical textbooks, pollen size relies on only 25–50 pollen grains, mostly for one plant and site. Lack of variation in pollen databases can cause limited application of machine learning approaches to real-world samples. Therefore, our study aims to investigate sources of spatial and temporal pollen trait variation for pollen morphology and fluorescence. For this purpose, 64,001 pollen grains from the four herbaceous and insect-pollinated plant species Achillea millefolium L., Lamium album L., Lathyrus vernus (L.) Bernh., and Lotus corniculatus L. sampled across four years and seven locations across Central Germany were measured using multispectral imaging flow cytometry. Observed trait variations were very species-specific; however, for most species, significant differences in spatial as well as temporal variation were found for at least one pollen trait. We could also show that this variability and the identity of a particular sample influence the accuracy of AI classifications and that multiple measurements of different origins provide the most robust AI-based identifications.

昆虫传粉植物花粉性状时空变异的多光谱成像流式细胞术研究。
人工智能(AI)在识别普通物体方面的准确性超过了人类,但在花粉粒识别方面仍然具有竞争力。造成这种差异的一个原因是花粉粒的广泛性状变异。在经典教科书中,花粉大小仅取决于25-50个花粉粒,主要针对一株植物和一个地点。花粉数据库中缺乏变化可能导致机器学习方法在现实世界样本中的应用受到限制。因此,本研究旨在探究花粉形态和荧光性状时空变异的来源。为此,从四种草本和昆虫传粉的植物中提取了64,001粒花粉,这些花粉来自Achillea millefolium L., Lamium album L., Lathyrus vernus (L.)。Bernh。使用多光谱成像流式细胞术测量了在德国中部7个地点采样4年的莲花。观察到的性状变异具有很强的物种特异性;然而,在大多数物种中,至少有一种花粉性状存在显著的时空差异。我们还可以证明,这种可变性和特定样本的身份会影响人工智能分类的准确性,并且不同来源的多个测量提供了最稳健的基于人工智能的识别。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Cytometry Part A
Cytometry Part A 生物-生化研究方法
CiteScore
8.10
自引率
13.50%
发文量
183
审稿时长
4-8 weeks
期刊介绍: Cytometry Part A, the journal of quantitative single-cell analysis, features original research reports and reviews of innovative scientific studies employing quantitative single-cell measurement, separation, manipulation, and modeling techniques, as well as original articles on mechanisms of molecular and cellular functions obtained by cytometry techniques. The journal welcomes submissions from multiple research fields that fully embrace the study of the cytome: Biomedical Instrumentation Engineering Biophotonics Bioinformatics Cell Biology Computational Biology Data Science Immunology Parasitology Microbiology Neuroscience Cancer Stem Cells Tissue Regeneration.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信