Parameterizing the particle size distribution of environmental DNA provides insights into its improved availability from the water

IF 2.9 4区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES
Toshiaki S. Jo
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引用次数: 0

Abstract

Previous studies estimated the particle size distribution (PSD) of environmental DNA (eDNA) to infer its persistence state in the water and to determine the size fraction in which eDNA particles are concentrated. These results, however, depend on the combination of filter pore sizes and may not necessarily provide the proper implications for the eDNA state and availability in the water. To address this issue, the present study proposes parameterizing the PSD using the Weibull distribution model, which has been widely used for various materials. Re-analyses of previous datasets show the Weibull parameters (representing the PSD profiles) significantly depend on species traits, marker types, temperature, and time passages after the removal of the individuals. The results allowed for calculating the proportion of eDNA captured using a given filter pore size and the filter pore size required to collect a given percentage of eDNA particles under various study designs and environmental conditions. The results also posed caveats indicating that the strategy for a sufficient eDNA collection method is not always uniform across experimental and environmental conditions. The findings contribute to a better understanding of the eDNA state and improved eDNA availability, refining eDNA-based biodiversity and ecosystem monitoring.

Abstract Image

以往的研究通过估算环境 DNA(eDNA)的粒度分布(PSD)来推断其在水中的持久状态,并确定 eDNA 颗粒集中的粒度部分。不过,这些结果取决于过滤器孔径的组合,不一定能正确说明 eDNA 在水中的状态和可用性。为了解决这个问题,本研究建议使用 Weibull 分布模型对 PSD 进行参数化,该模型已被广泛应用于各种材料。对以前数据集的重新分析表明,Weibull 参数(代表 PSD 曲线)与物种特征、标记类型、温度和个体移除后的时间段有很大关系。研究结果可以计算在不同研究设计和环境条件下,使用特定过滤孔径捕获的 eDNA 比例,以及收集特定比例 eDNA 颗粒所需的过滤孔径。研究结果还提出了一些注意事项,表明在不同的实验和环境条件下,足够的 eDNA 采集方法策略并不总是一致的。这些发现有助于更好地了解 eDNA 的状态,提高 eDNA 的可用性,完善基于 eDNA 的生物多样性和生态系统监测。
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来源期刊
Environmental Monitoring and Assessment
Environmental Monitoring and Assessment 环境科学-环境科学
CiteScore
4.70
自引率
6.70%
发文量
1000
审稿时长
7.3 months
期刊介绍: Environmental Monitoring and Assessment emphasizes technical developments and data arising from environmental monitoring and assessment, the use of scientific principles in the design of monitoring systems at the local, regional and global scales, and the use of monitoring data in assessing the consequences of natural resource management actions and pollution risks to man and the environment.
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