A generic cross-seeding approach to protein crystallization.

IF 6.1 3区 材料科学 Q1 Biochemistry, Genetics and Molecular Biology
Journal of Applied Crystallography Pub Date : 2025-02-17 eCollection Date: 2025-04-01 DOI:10.1107/S1600576725000457
Ido Caspy, Shan Tang, Dom Bellini, Fabrice Gorrec
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引用次数: 0

Abstract

Obtaining diffraction-quality crystals is often the rate-limiting step during structure determination of biological macromolecules by X-ray crystallography. To address this problem, we investigated a cross-seeding approach with a mixture integrating a heterogeneous set of protein crystal fragments to be used as generic seeds. The fragments are nanometre-sized templates chosen to promote crystal nucleation of protein samples unrelated to the proteins forming the seeds. An atypical crystal form of the human serine hydrolase retinoblastoma binding protein 9 was obtained by adding the mixture to the protein sample before performing standard crystallization assays. The structure was solved by X-ray crystallography at 1.4 Å resolution. Follow-up experiments showed that crystal fragments of α-amylase were critical components in this particular result. The limitations and future applications of our experimental developments are discussed.

蛋白质结晶的一种通用交叉播种方法。
在用x射线晶体学测定生物大分子的结构时,获得衍射质量的晶体往往是限制速度的步骤。为了解决这个问题,我们研究了一种交叉播种方法,将一组异质蛋白质晶体片段混合在一起作为通用种子。这些片段是纳米大小的模板,用来促进与形成种子的蛋白质无关的蛋白质样品的结晶成核。在进行标准结晶分析之前,将混合物加入蛋白质样品中,获得了非典型的人丝氨酸水解酶视网膜母细胞瘤结合蛋白9的晶体形式。该结构通过x射线晶体学在1.4 Å分辨率下求解。后续实验表明,α-淀粉酶的晶体片段是这一特殊结果的关键成分。讨论了实验发展的局限性和未来的应用。
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来源期刊
CiteScore
10.00
自引率
3.30%
发文量
178
审稿时长
4.7 months
期刊介绍: Many research topics in condensed matter research, materials science and the life sciences make use of crystallographic methods to study crystalline and non-crystalline matter with neutrons, X-rays and electrons. Articles published in the Journal of Applied Crystallography focus on these methods and their use in identifying structural and diffusion-controlled phase transformations, structure-property relationships, structural changes of defects, interfaces and surfaces, etc. Developments of instrumentation and crystallographic apparatus, theory and interpretation, numerical analysis and other related subjects are also covered. The journal is the primary place where crystallographic computer program information is published.
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