Development of a m6A- and ferroptosis-related LncRNA signature for forecasting prognosis and treatment response in cervical cancer.

IF 3.4 2区 医学 Q2 ONCOLOGY
Kaiting Wen, Lili Wang, Huancheng Su, Lijun Yu, Sanyuan Zhang, Meiyan Wei, Yaling Wang, Le Zhao, Yan Guo
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引用次数: 0

Abstract

Background: N6-methyladenosine (m6A) and ferroptosis are involved in the development and prognosis of various cancers via long noncoding RNAs (lncRNAs). This study aimed to investigate the cervical cancer subtypes based on m6A-and ferroptosis-related lncRNAs (mfrlncRNAs) and to construct a mfrlncRNA signature to predict cervical cancer prognosis and treatment response.

Methods: mfrlncRNA-related cervical cancer subtypes were identified based on public datasets, and their differences in terms of prognosis, immune cell infiltration, and biological mechanisms were compared. Moreover, prognosis-related mfrlncRNAs were identified to construct a prognostic signature. A nomogram was constructed based on the independent prognostic factors. Immune characteristics, immunotherapy response predictions, and drug sensitivity analyses were performed for both risk groups. Furthermore, quantitative PCR was performed to validate the differential expression of the signature mfrlncRNAs in clinical samples.

Results: In total, 549 differentially expressed mfrlncRNAs were identified between cervical cancer and normal samples. Two mfrlncRNA-related cervical cancer subtypes that exhibited distinct prognoses, immune characteristics, and biological mechanisms were identified. A prognostic signature was developed using six prognostic mfrlncRNAs: AC016065.1, AC096992.2, AC119427.1, AC133644.1, AL121944.1, and FOXD1_AS1. This prognostic signature exhibited high performance in predicting the prognosis of cervical cancer. Moreover, RiskScore and stage were identified as independent prognostic factors, and a nomogram was constructed to accurately forecast overall survival. Furthermore, patients in the low-risk group had a more active immunotherapy response and were more sensitive to chemotherapeutic drugs such as imatinib. Upregulated expression of AC119427.1, AC133644.1, AL121944.1, and FOXD1_AS1 was observed in the tumor samples.

Conclusions: The six-mfrlncRNA signature is a new biomarker for forecasting prognosis and treatment response in cervical cancer.

m6A和嗜铁相关LncRNA标记的发展预测宫颈癌预后和治疗反应。
背景:n6 -甲基腺苷(m6A)和铁凋亡通过长链非编码rna (lncRNAs)参与多种癌症的发生和预后。本研究旨在研究基于m6a和铁凋亡相关lncrna (mfrlncRNA)的宫颈癌亚型,构建mfrlncRNA特征来预测宫颈癌预后和治疗反应。方法:基于公共数据集对mfrlncrna相关宫颈癌亚型进行鉴定,比较其预后、免疫细胞浸润、生物学机制等方面的差异。此外,还鉴定了与预后相关的mfrlncrna以构建预后特征。基于独立的预后因素构建了nomogram。对两个危险组进行免疫特性、免疫治疗反应预测和药物敏感性分析。此外,通过定量PCR验证了mfrlncrna在临床样本中的差异表达。结果:在宫颈癌与正常样本中共鉴定出549个差异表达的mfrlncrna。鉴定出两种mfrlncrna相关的宫颈癌亚型,它们表现出不同的预后、免疫特征和生物学机制。使用6个预后mfrlncrna: AC016065.1、AC096992.2、AC119427.1、AC133644.1、AL121944.1和FOXD1_AS1开发了预后特征。这种预后特征在预测宫颈癌预后方面表现出很高的性能。此外,将RiskScore和分期确定为独立的预后因素,并构建nomogram来准确预测总生存期。此外,低危组患者的免疫治疗反应更积极,对伊马替尼等化疗药物更敏感。在肿瘤样本中,AC119427.1、AC133644.1、AL121944.1、FOXD1_AS1表达上调。结论:6 - mfrlncrna标记是预测宫颈癌预后和治疗反应的一种新的生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
BMC Cancer
BMC Cancer 医学-肿瘤学
CiteScore
6.00
自引率
2.60%
发文量
1204
审稿时长
6.8 months
期刊介绍: BMC Cancer is an open access, peer-reviewed journal that considers articles on all aspects of cancer research, including the pathophysiology, prevention, diagnosis and treatment of cancers. The journal welcomes submissions concerning molecular and cellular biology, genetics, epidemiology, and clinical trials.
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