Feature Selection in Breast Cancer Gene Expression Data Using KAO and AOA with SVM Classification.

IF 3.5 3区 医学 Q1 HEALTH CARE SCIENCES & SERVICES
Abrar Yaqoob, Navneet Kumar Verma
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引用次数: 0

Abstract

Breast cancer classification using gene expression data presents significant challenges due to high dimensionality and complexity. This study introduces a novel hybrid framework integrating the Kashmiri Apple Optimization Algorithm (KAO) and the Armadillo Optimization Algorithm (AOA) for effective feature selection, coupled with Support Vector Machines (SVM) for precise classification. The dual-stage approach leverages KAO for global exploration of informative genes and AOA for refining the selection through local optimization, addressing issues of redundancy and premature convergence. Applied to breast cancer datasets, the proposed method achieved a classification accuracy of 98.97%, precision of 98.46%, recall of 100%, and an F1-score of 99.22% using a subset of 15 genes. The robustness of the framework was validated across varying subset sizes, demonstrating consistent high performance. By optimizing feature relevance and redundancy, the KAO-AOA framework provides a promising tool for gene-based cancer prediction with potential applications to other cancer datasets and real-world clinical use.

基于KAO和AOA支持向量机分类的乳腺癌基因表达数据特征选择。
由于基因表达数据的高维性和复杂性,使用基因表达数据进行乳腺癌分类提出了重大挑战。本文提出了一种新的混合框架,将克什米尔苹果优化算法(KAO)和犰狳优化算法(AOA)结合起来进行有效的特征选择,并结合支持向量机(SVM)进行精确分类。双阶段方法利用KAO进行信息基因的全局探索,AOA通过局部优化来优化选择,解决冗余和过早收敛的问题。将该方法应用于乳腺癌数据集,使用15个基因子集,分类准确率为98.97%,精密度为98.46%,召回率为100%,f1评分为99.22%。该框架的鲁棒性在不同的子集大小上得到了验证,展示了一致的高性能。通过优化特征相关性和冗余,KAO-AOA框架为基于基因的癌症预测提供了一个有前途的工具,具有潜在的应用于其他癌症数据集和现实世界的临床应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Medical Systems
Journal of Medical Systems 医学-卫生保健
CiteScore
11.60
自引率
1.90%
发文量
83
审稿时长
4.8 months
期刊介绍: Journal of Medical Systems provides a forum for the presentation and discussion of the increasingly extensive applications of new systems techniques and methods in hospital clinic and physician''s office administration; pathology radiology and pharmaceutical delivery systems; medical records storage and retrieval; and ancillary patient-support systems. The journal publishes informative articles essays and studies across the entire scale of medical systems from large hospital programs to novel small-scale medical services. Education is an integral part of this amalgamation of sciences and selected articles are published in this area. Since existing medical systems are constantly being modified to fit particular circumstances and to solve specific problems the journal includes a special section devoted to status reports on current installations.
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