Synthesis, antioxidant activity, DFT simulations, molecular docking studies of Schiff base derivatives containing 2-(2-hydrazinyl) thiazole moiety

IF 4 2区 化学 Q2 CHEMISTRY, PHYSICAL
Yu Zhu , Ying Wang , Huimin Zhao , Jinli Wei , Haoyuan Chen , Maroosha Javed , Linghua Zhuang , Guowei Wang
{"title":"Synthesis, antioxidant activity, DFT simulations, molecular docking studies of Schiff base derivatives containing 2-(2-hydrazinyl) thiazole moiety","authors":"Yu Zhu ,&nbsp;Ying Wang ,&nbsp;Huimin Zhao ,&nbsp;Jinli Wei ,&nbsp;Haoyuan Chen ,&nbsp;Maroosha Javed ,&nbsp;Linghua Zhuang ,&nbsp;Guowei Wang","doi":"10.1016/j.molstruc.2025.142150","DOIUrl":null,"url":null,"abstract":"<div><div>In this study, Schiff base derivatives <strong>5a-5f</strong> containing 2-(2-hydrazinyl) thiazole moiety were synthesized and confirmed with spectral analysis (<sup>1</sup>H NMR, <sup>13</sup>C NMR, IR, MS). The antioxidant activity was evaluated using DPPH free radical scavenging assay. Compound <strong>5c</strong> (IC<sub>50</sub> = 21.71 ± 2.64), <strong>5d</strong> (IC<sub>50</sub> = 22.59 ± 4.26) demonstrated good antioxidant activity. Density functional theory (DFT) calculations were performed to analyze the optimized geometric structures, including natural bond orbital (NBO) analysis, frontier molecular orbital (FMO) analysis, and molecular electrostatic potential (MEP) analysis. The most credible transition observed in compound <strong>5a</strong> was π (C21-C22) → π*(C23-C24), with highest stabilization energy of 22.67 kcal/mol. Compounds <strong>5a-5f</strong> exhibited strong interactions and favorable binding energies. The binding affinity of Compounds <strong>5a-5f</strong> ranged from -5.42 to -6.37 kcal/mol. The binding affinity of compound <strong>5a</strong> was -6.31 kcal/mol. Molecular docking studies elucidated that compounds <strong>5a-5f</strong> showed a certain binding ability to human antioxidant enzyme receptor 3MNG, supporting the experimental antioxidant activity results. Compound <strong>5a</strong> demonstrated the most active antioxidant property. Two hydrogen bonds were found, as N13-H14…GLU27:O (GLU27, 2.15 Å), ASN24:H…S18 (ASN24, 2.33 Å). Compounds <strong>5a-5f</strong> adhered to Lipinski's Rule of Five. Compounds <strong>5a, 5b</strong>, and <strong>5d</strong> demonstrated relative higher Drug-Likeness values. These results will shed light on design, preparation of new Schiff base antioxidants and provide important information for optimizing the chemical structures of antioxidants with higher anti-oxidative properties.</div></div>","PeriodicalId":16414,"journal":{"name":"Journal of Molecular Structure","volume":"1336 ","pages":"Article 142150"},"PeriodicalIF":4.0000,"publicationDate":"2025-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Structure","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S002228602500835X","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

Abstract

In this study, Schiff base derivatives 5a-5f containing 2-(2-hydrazinyl) thiazole moiety were synthesized and confirmed with spectral analysis (1H NMR, 13C NMR, IR, MS). The antioxidant activity was evaluated using DPPH free radical scavenging assay. Compound 5c (IC50 = 21.71 ± 2.64), 5d (IC50 = 22.59 ± 4.26) demonstrated good antioxidant activity. Density functional theory (DFT) calculations were performed to analyze the optimized geometric structures, including natural bond orbital (NBO) analysis, frontier molecular orbital (FMO) analysis, and molecular electrostatic potential (MEP) analysis. The most credible transition observed in compound 5a was π (C21-C22) → π*(C23-C24), with highest stabilization energy of 22.67 kcal/mol. Compounds 5a-5f exhibited strong interactions and favorable binding energies. The binding affinity of Compounds 5a-5f ranged from -5.42 to -6.37 kcal/mol. The binding affinity of compound 5a was -6.31 kcal/mol. Molecular docking studies elucidated that compounds 5a-5f showed a certain binding ability to human antioxidant enzyme receptor 3MNG, supporting the experimental antioxidant activity results. Compound 5a demonstrated the most active antioxidant property. Two hydrogen bonds were found, as N13-H14…GLU27:O (GLU27, 2.15 Å), ASN24:H…S18 (ASN24, 2.33 Å). Compounds 5a-5f adhered to Lipinski's Rule of Five. Compounds 5a, 5b, and 5d demonstrated relative higher Drug-Likeness values. These results will shed light on design, preparation of new Schiff base antioxidants and provide important information for optimizing the chemical structures of antioxidants with higher anti-oxidative properties.

Abstract Image

本研究合成了含有 2-(2-肼基)噻唑分子的希夫碱衍生物 5a-5f,并通过光谱分析(1H NMR、13C NMR、IR、MS)进行了确认。抗氧化活性采用 DPPH 自由基清除试验进行评估。化合物 5c(IC50 = 21.71 ± 2.64)和 5d(IC50 = 22.59 ± 4.26)表现出良好的抗氧化活性。密度泛函理论(DFT)计算分析了优化的几何结构,包括天然键轨道(NBO)分析、前沿分子轨道(FMO)分析和分子静电位(MEP)分析。在化合物 5a 中观察到的最可靠的转变是 π (C21-C22) → π*(C23-C24),稳定能最高,为 22.67 kcal/mol。化合物 5a-5f 具有很强的相互作用和良好的结合能。化合物 5a-5f 的结合亲和力介于 -5.42 至 -6.37 kcal/mol 之间。化合物 5a 的结合亲和力为 -6.31 kcal/mol。分子对接研究表明,化合物 5a-5f 与人类抗氧化酶受体 3MNG 具有一定的结合能力,支持了抗氧化活性的实验结果。化合物 5a 的抗氧化活性最强。发现了两个氢键,分别为 N13-H14...GLU27:O (GLU27, 2.15 Å)、ASN24:H...S18 (ASN24, 2.33 Å)。化合物 5a-5f 遵循了利宾斯基的 "五人法则"。化合物 5a、5b 和 5d 的药物相似度值相对较高。这些结果将有助于设计和制备新的席夫碱抗氧化剂,并为优化具有更高抗氧化性的抗氧化剂的化学结构提供重要信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Journal of Molecular Structure
Journal of Molecular Structure 化学-物理化学
CiteScore
7.10
自引率
15.80%
发文量
2384
审稿时长
45 days
期刊介绍: The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including: • Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.) • Chemical intermediates • Molecules in excited states • Biological molecules • Polymers. The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example: • Infrared spectroscopy (mid, far, near) • Raman spectroscopy and non-linear Raman methods (CARS, etc.) • Electronic absorption spectroscopy • Optical rotatory dispersion and circular dichroism • Fluorescence and phosphorescence techniques • Electron spectroscopies (PES, XPS), EXAFS, etc. • Microwave spectroscopy • Electron diffraction • NMR and ESR spectroscopies • Mössbauer spectroscopy • X-ray crystallography • Charge Density Analyses • Computational Studies (supplementing experimental methods) We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信