Dual-Path Multi-Scale CNN for Precise Classification of Non-Small Cell Lung Cancer

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Vidhi Bishnoi,  Lavanya, Palak Handa, Nidhi Goel
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引用次数: 0

Abstract

Non-Small Cell Lung Cancer (NSCLC) has the highest cancer-related mortality rate worldwide. While biopsy-based diagnosis is critical for prognosis and treatment, the intricate anatomical features in Whole Slide Images (WSIs) make manual classification challenging for pathologists. Current deep learning models have been developed to aid in the automatic classification of NSCLC, but many rely on extensive manual annotations and lack efficient multi-scale feature extraction, limiting their ability to capture diverse patterns in WSIs. There is a need to explore multipath, multi-scale Convolutional Neural Networks (CNN) that can effectively capture these diverse patterns in WSIs. This study proposes a novel deep learning model, a Multi-scale, Dual-Path CNN (MDP-CNN), designed to automatically classify NSCLC subtypes by capturing heterogeneous patterns and features in WSIs. The model was trained on two independent datasets, LC25000 and The Cancer Genome Atlas (TCGA), demonstrating notable improvements in performance metrics, achieving accuracy scores of 0.981 and 0.958, Area Under Curve (AUC) scores of 0.978 and 0.995, and kappa scores of 0.957 and 0.903 for the LC25000 and TCGA datasets, respectively. Extensive analyses, including ablation studies, interpretation plots, and cross-dataset analysis, were conducted to demonstrate the efficacy of the proposed model. Multi-scale processing improved the model's precision in classifying lung cancer subtypes by capturing variations in histopathological features across different resolutions. The proposed model outperformed state-of-the-art models by approximately 8% in accuracy and 3% in AUC, demonstrating the effectiveness of MDP CNNs in improving WSI-based diagnostics and supporting automated NSCLC classification and clinical decisions.

用于非小细胞肺癌精确分类的双路径多尺度 CNN
非小细胞肺癌(NSCLC)是世界上死亡率最高的癌症。虽然基于活检的诊断对预后和治疗至关重要,但全切片图像(wsi)复杂的解剖特征使病理学家难以进行人工分类。目前的深度学习模型已被开发用于辅助NSCLC的自动分类,但许多模型依赖于大量的手动注释,缺乏有效的多尺度特征提取,限制了它们在wsi中捕获不同模式的能力。有必要探索多路径、多尺度卷积神经网络(CNN),以有效地捕获wsi中的这些不同模式。本研究提出了一种新的深度学习模型,即多尺度双路径CNN (MDP-CNN),旨在通过捕获wsi中的异质模式和特征来自动分类NSCLC亚型。该模型在LC25000和The Cancer Genome Atlas (TCGA)两个独立的数据集上进行了训练,结果表明该模型在性能指标上有了显著的提高,LC25000和TCGA数据集的准确率分别为0.981和0.958,曲线下面积(Area Under Curve, AUC)得分分别为0.978和0.995,kappa得分分别为0.957和0.903。研究人员进行了广泛的分析,包括消融研究、解释图和跨数据集分析,以证明所提出模型的有效性。多尺度处理通过捕获不同分辨率下组织病理特征的变化,提高了模型在肺癌亚型分类方面的精度。该模型的准确率和AUC分别比目前最先进的模型高出约8%和3%,证明了MDP cnn在改善基于wsi的诊断和支持自动NSCLC分类和临床决策方面的有效性。
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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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