Predicting Fluorescence Emission Wavelengths and Quantum Yields via Machine Learning.

IF 5.6 2区 化学 Q1 CHEMISTRY, MEDICINAL
Rubens C Souza, Julio C Duarte, Ronaldo R Goldschmidt, Itamar Borges
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引用次数: 0

Abstract

The search for functional fluorescent organic materials can significantly benefit from the rapid and accurate predictions of photophysical properties. However, screening large numbers of potential fluorophore molecules in different solvents faces limitations of quantum mechanical calculations and experimental measurements. In this work, we develop machine learning (ML) algorithms for predicting the fluorescence of a molecule, focusing on two target properties: emission wavelengths (WLs) and quantum yields (QYs). For this purpose, we employ the Deep4Chem database which contains the optical properties of 20,236 combinations of 7,016 chromophores in 365 different solvents. Several chemical descriptors, or features, were selected as inputs for each model, and each molecule was characterized by its SMILES fingerprint. The Shapley additive explanations (SHAP) technique was used to rationalize the results, showing that the most impactful properties are chromophore-related, as expected from chemical intuition. For the best-performing model, the Random Forest, our results for the test set show a root-mean-square error (RMSE) of 28.8 nm (0.15 eV) for WLs and 0.19 for QYs. The developed ML models were used to predict, thus completing, the missing results for the WL and QY target properties in the original Deep4Chem database, resulting in two new databases: one for each property. Testing our ML models for each target property in molecules not included in the original Deep4Chem database gave good results.

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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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