{"title":"Stabilization of a transition state by excited vibration and impact on the reaction rate in the three-body Lennard-Jones system.","authors":"Yoshiyuki Y Yamaguchi","doi":"10.1103/PhysRevE.111.024204","DOIUrl":null,"url":null,"abstract":"<p><p>The three-body Lennard-Jones system on the plane has a transition state, which is the straight conformation located at a saddle point of the potential-energy landscape. We show that the transition state can be dynamically stabilized by excited vibration of particle distances. The stabilization mechanism is explained theoretically and is verified by performing molecular dynamics simulations. We also examine whether the dynamical stabilization gives an impact on the reaction rate between the two isomers of equilateral triangle conformations by comparing with the transition-state theory.</p>","PeriodicalId":48698,"journal":{"name":"Physical Review E","volume":"111 2-1","pages":"024204"},"PeriodicalIF":2.2000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physical Review E","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1103/PhysRevE.111.024204","RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHYSICS, FLUIDS & PLASMAS","Score":null,"Total":0}
引用次数: 0
Abstract
The three-body Lennard-Jones system on the plane has a transition state, which is the straight conformation located at a saddle point of the potential-energy landscape. We show that the transition state can be dynamically stabilized by excited vibration of particle distances. The stabilization mechanism is explained theoretically and is verified by performing molecular dynamics simulations. We also examine whether the dynamical stabilization gives an impact on the reaction rate between the two isomers of equilateral triangle conformations by comparing with the transition-state theory.
期刊介绍:
Physical Review E (PRE), broad and interdisciplinary in scope, focuses on collective phenomena of many-body systems, with statistical physics and nonlinear dynamics as the central themes of the journal. Physical Review E publishes recent developments in biological and soft matter physics including granular materials, colloids, complex fluids, liquid crystals, and polymers. The journal covers fluid dynamics and plasma physics and includes sections on computational and interdisciplinary physics, for example, complex networks.