Segment Like A Doctor: Learning reliable clinical thinking and experience for pancreas and pancreatic cancer segmentation

IF 10.7 1区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Liwen Zou , Yingying Cao , Ziwei Nie , Liang Mao , Yudong Qiu , Zhongqiu Wang , Zhenghua Cai , Xiaoping Yang
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引用次数: 0

Abstract

Pancreatic cancer is a lethal invasive tumor with one of the worst prognosis. Accurate and reliable segmentation for pancreas and pancreatic cancer on computerized tomography (CT) images is vital in clinical diagnosis and treatment. Although certain deep learning-based techniques have been tentatively applied to this task, current performance of pancreatic cancer segmentation is far from meeting the clinical needs due to the tiny size, irregular shape and extremely uncertain boundary of the cancer. Besides, most of the existing studies are established on the black-box models which only learn the annotation distribution instead of the logical thinking and diagnostic experience of high-level medical experts, the latter is more credible and interpretable. To alleviate the above issues, we propose a novel Segment-Like-A-Doctor (SLAD) framework to learn the reliable clinical thinking and experience for pancreas and pancreatic cancer segmentation on CT images. Specifically, SLAD aims to simulate the essential logical thinking and experience of doctors in the progressive diagnostic stages of pancreatic cancer: organ, lesion and boundary stage. Firstly, in the organ stage, an Anatomy-aware Masked AutoEncoder (AMAE) is introduced to model the doctors’ overall cognition for the anatomical distribution of abdominal organs on CT images by self-supervised pretraining. Secondly, in the lesion stage, a Causality-driven Graph Reasoning Module (CGRM) is designed to learn the global judgment of doctors for lesion detection by exploring topological feature difference between the causal lesion and the non-causal organ. Finally, in the boundary stage, a Diffusion-based Discrepancy Calibration Module (DDCM) is developed to fit the refined understanding of doctors for uncertain boundary of pancreatic cancer by inferring the ambiguous segmentation discrepancy based on the trustworthy lesion core. Experimental results on three independent datasets demonstrate that our approach boosts pancreatic cancer segmentation accuracy by 4%–9% compared with the state-of-the-art methods. Additionally, the tumor-vascular involvement analysis is also conducted to verify the superiority of our method in clinical applications. Our source codes will be publicly available at https://github.com/ZouLiwen-1999/SLAD.
像医生一样分割:学习可靠的胰腺和胰腺癌分割的临床思维和经验
胰腺癌是一种致命的侵袭性肿瘤,预后最差。计算机断层扫描(CT)对胰腺和胰腺癌图像的准确、可靠的分割对临床诊断和治疗至关重要。虽然一些基于深度学习的技术已经初步应用于这项任务,但由于胰腺癌的体积小,形状不规则,边界极不确定,目前的胰腺癌分割性能远远不能满足临床需要。此外,现有的研究大多建立在黑箱模型上,黑箱模型只学习注释分布,而没有学习高水平医学专家的逻辑思维和诊断经验,后者更具可信度和可解释性。为了解决上述问题,我们提出了一种新的SLAD (segmentation - like - a - doctor)框架,以学习胰腺和胰腺癌CT图像分割的可靠临床思路和经验。具体而言,SLAD旨在模拟医生在胰腺癌进展诊断阶段(器官期、病变期和边界期)的基本逻辑思维和经验。首先,在器官阶段,引入解剖感知蒙面自动编码器(AMAE),通过自监督预训练,模拟医生对腹部器官在CT图像上解剖分布的整体认知;其次,在病变阶段,设计因果驱动图推理模块(causal -driven Graph Reasoning Module, CGRM),通过探索因果病变与非因果器官的拓扑特征差异,学习医生对病变检测的全局判断。最后,在边界阶段,开发了基于扩散的差异校准模块(Diffusion-based difference Calibration Module, DDCM),通过基于可信赖病灶核心推断模糊分割差异,拟合医生对胰腺癌边界不确定的精细化理解。在三个独立数据集上的实验结果表明,与目前最先进的方法相比,我们的方法将胰腺癌分割准确率提高了4%-9%。此外,还进行了肿瘤血管受累分析,以验证我们的方法在临床应用中的优越性。我们的源代码将在https://github.com/ZouLiwen-1999/SLAD上公开提供。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Medical image analysis
Medical image analysis 工程技术-工程:生物医学
CiteScore
22.10
自引率
6.40%
发文量
309
审稿时长
6.6 months
期刊介绍: Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.
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