Synthesizing Genotoxicity Results in the MultiFlow Assay With Point-of-Departure Analysis and ToxPi Visualization Techniques

IF 2.3 4区 医学 Q3 ENVIRONMENTAL SCIENCES
Yusuf Hussien, Stephen D. Dertinger, George E. Johnson
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Abstract

In vitro genotoxicity has historically served a hazard identification role, with simple binary outcomes provided for each of several single endpoint assays. This will need to change, given: (i) efforts to curtail animal testing, (ii) the increased use of multiplexed in vitro assays and the ongoing development of NAMS, and (iii) the desire to holistically consider quantitative results from multiple biomarkers/endpoints that take potency into consideration. To help facilitate more quantitative analyses of multiple biomarkers and/or assay streams, we explored the combined use of PROAST and Toxicological Prioritization Index (ToxPi) software. As a proofofconcept, this investigation employed the MultiFlow DNA damage assay, focusing on γH2AX and p53 biomarkers at two time points, whereby 10 genotoxicants were evaluated in the presence and absence of rat liver S9 metabolic activation. Whereas PROAST was used to calculate BMD point estimates and confidence intervals (CIs), ToxPi synthesized the BMD results into visual, quantitative summaries conveying genotoxicity and metabolic properties. Our analyses suggest that ToxPi's data synthesis and visualization modules provide useful insights into compound response, chemical grouping, and genotoxic mechanisms. By integrating multiple data sources, we find that ToxPi offers a powerful complementary approach to traditional BMD CI graphs, particularly for the simultaneous analysis of multiple biomarkers, enhancing chemical potency analysis of complex datasets.

Abstract Image

用出发点分析和ToxPi可视化技术合成多流分析的遗传毒性结果。
体外遗传毒性在历史上一直是一种危险识别作用,为几个单终点分析提供了简单的二元结果。考虑到:(i)减少动物试验的努力,(ii)体外多重检测的使用增加和NAMS的持续发展,以及(iii)考虑效力的多种生物标志物/终点的整体定量结果的愿望,这种情况需要改变。为了方便对多种生物标志物和/或分析流进行更多的定量分析,我们探索了PROAST和毒理学优先排序指数(ToxPi)软件的联合使用。为了验证这一概念,本研究采用了MultiFlow DNA损伤试验,重点关注两个时间点的γ - h2ax和p53生物标志物,在存在和不存在大鼠肝脏S9代谢激活的情况下评估了10种基因毒物。PROAST用于计算骨密度点估计值和置信区间(ci),而ToxPi将骨密度结果合成为可视化、定量的摘要,传达遗传毒性和代谢特性。我们的分析表明,ToxPi的数据合成和可视化模块为化合物反应、化学分组和遗传毒性机制提供了有用的见解。通过整合多个数据源,我们发现ToxPi为传统的BMD CI图提供了一个强大的补充方法,特别是对于多个生物标志物的同时分析,增强了复杂数据集的化学效力分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
5.40
自引率
10.70%
发文量
52
审稿时长
12-24 weeks
期刊介绍: Environmental and Molecular Mutagenesis publishes original research manuscripts, reviews and commentaries on topics related to six general areas, with an emphasis on subject matter most suited for the readership of EMM as outlined below. The journal is intended for investigators in fields such as molecular biology, biochemistry, microbiology, genetics and epigenetics, genomics and epigenomics, cancer research, neurobiology, heritable mutation, radiation biology, toxicology, and molecular & environmental epidemiology.
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