Crystal structures of six complexes of phosphane chalcogenides R1R2R3PE (R = tert-butyl or isopropyl, E = S or Se) with the metal halides MX2 (M = Pd or Pt, X = Cl or Br), two halochalcogenylphosphonium derivatives (tBu2iPrPEBr)2[Pd2Br6] and one hydrolysis product
{"title":"Crystal structures of six complexes of phosphane chalcogenides R1R2R3PE (R = tert-butyl or isopropyl, E = S or Se) with the metal halides MX2 (M = Pd or Pt, X = Cl or Br), two halochalcogenylphosphonium derivatives (tBu2iPrPEBr)2[Pd2Br6] and one hydrolysis product","authors":"Daniel Upmann , Peter G. Jones","doi":"10.1107/S2056989025000805","DOIUrl":null,"url":null,"abstract":"<div><div>Various compounds involving trialkylphosphane chalcogenides (or their derivatives) and palladium or platinum dihalides were structurally characterized and their intra- and intermolecular interactions and metrical parameters were analysed. General comments on the SFAC command are also included.</div></div><div><div>The <em>L</em><sub>2</sub><em>MX</em><sub>2</sub> complexes <strong>1</strong>–<strong>5</strong> (<strong>1</strong>: <em>L</em> = <sup><em>t</em></sup>Bu<sup>i</sup>Pr<sub>2</sub>PSe, <em>M</em> = Pd, <em>X</em> = Cl; <strong>2</strong>: <em>L</em> = <sup><em>t</em></sup>Bu<sub>2</sub><sup>i</sup>PrPSe, <em>M</em> = Pd, <em>X</em> = Cl; <strong>3</strong>: <em>L</em> = <sup><em>t</em></sup>Bu<sub>2</sub><sup>i</sup>PrPSe, <em>M</em> = Pd, <em>X</em> = Br; <strong>4</strong>: <em>L</em> = <sup><em>t</em></sup>Bu<sub>2</sub><sup>i</sup>PrPS, <em>M</em> = Pd, <em>X</em> = Br; <strong>5</strong>: <em>L</em> = <sup><em>t</em></sup>Bu<sub>2</sub><sup>i</sup>PrPS, <em>M</em> = Pt, <em>X</em> = Cl) {systematic names: (<em>tert</em>-butyldiisopropylphosphine selenide-κ<em>Se</em>)dichloridopalladium(II), [PdCl<sub>2</sub>(C<sub>10</sub>H<sub>23</sub>PSe)<sub>2</sub>] (<strong>1</strong>), (di-<em>tert</em>-butylisopropylphosphine selenide-κ<em>Se</em>)dichloridopalladium(II), [PdCl<sub>2</sub>(C<sub>11</sub>H<sub>25</sub>PSe)<sub>2</sub>] (<strong>2</strong>), dibromido(di-<em>tert</em>-butylisopropylphosphine selenide-κ<em>Se</em>)palladium(II), [PdBr<sub>2</sub>(C<sub>11</sub>H<sub>25</sub>PSe)<sub>2</sub>] (<strong>3</strong>), dibromido(di-<em>tert</em>-butylisopropylphosphine sulfide-κ<em>S</em>)palladium(II), [PdBr<sub>2</sub>(C<sub>11</sub>H<sub>25</sub>PS)<sub>2</sub>] (<strong>4</strong>), dichlorido(di-<em>tert</em>-butylisopropylphosphine sulfide-κ<em>S</em>)palladium(II), [PdCl<sub>2</sub>(C<sub>11</sub>H<sub>25</sub>PS)<sub>2</sub>] (<strong>5</strong>)} all display a <em>trans</em> configuration with square-planar geometry at the metal atom. Compounds <strong>2</strong> and <strong>3</strong> are isotypic. The molecules of <strong>1</strong> and <strong>4</strong> display crystallographic inversion symmetry; compound <strong>5</strong> involves two independent molecules, each with inversion symmetry but with differing orientations of the trialkylphosphane groups. Chemically equivalent bond lengths all lie in narrow ranges, whereby the values for palladium and platinum compounds scarcely differ. Compound <strong>6</strong>, (<sup><em>t</em></sup>Bu<sup>i</sup>Pr<sub>2</sub>PS)<sub>2</sub>Pd<sub>2</sub>Cl<sub>4</sub> {systematic name: di-μ-chlorido-bis[(<em>tert</em>-butyldiisopropylphosphine sulfide-κ<em>S</em>)chloridopalladium(II)], [PdCl<sub>2</sub>(C<sub>10</sub>H<sub>23</sub>PS)<sub>2</sub>]}, is dinuclear with a central Pd<sub>2</sub>Cl<sub>2</sub> ring, and displays crystallographic inversion symmetry. The bonds to the bridging are longer than those to the terminal chlorine atoms; the Pd—S bond is shorter than the <em>M</em>—S bonds in <strong>4</strong> and <strong>5</strong>, reflecting the weaker <em>trans</em> influence of (bridging) chlorine compared to sulfur. Compounds <strong>7</strong> and <strong>8</strong>, 2(<sup><em>t</em></sup>Bu<sub>2</sub><sup>i</sup>PrP<em>E</em>Br)<sup>+</sup> [Pd<sub>2</sub>Br<sub>6</sub>]<sup>2−</sup> with <em>E</em> = S for <strong>7</strong> and Se for <strong>8</strong> {systematic names: (bromosulfanyl)di-<em>tert</em>-butylisopropylphosphanium di-μ-bromido-bis[dibromidopalladium(II)], (C<sub>11</sub>H<sub>25</sub>BrPS)<sub>2</sub>[Pd<sub>2</sub>Br<sub>6</sub>] (<strong>7</strong>) and (bromoselanyl)di-<em>tert</em>-butylisopropylphosphanium di-μ-bromido-bis[dibromidopalladium(II)], (C<sub>11</sub>H<sub>25</sub>BrPS<sub>2</sub>)<sub>2</sub>[Pd<sub>2</sub>Br<sub>6</sub>], (<strong>8</strong>)}, were obtained by oxidizing the appropriate Pd<sup>II</sup> precursors with elemental bromine; they are not isotypic. The ions are connected by very short halogen bonds Br⋯Br. For both compounds, two <em>E</em>⋯Br contacts further link the cations and anions to form ribbons. Compound <strong>9</strong> {systematic name: bis[dimethyl(sulfanylidene)phosphinito-κ<em>Se</em>]bis(hydroxydiisopropylphosphine selenide-κ<em>Se</em>)palladium(II), [Pd(C<sub>6</sub>H<sub>14</sub>OP)<sub>2</sub>(C<sub>6</sub>H<sub>15</sub>OP)<sub>2</sub>], {(<sup>i</sup>Pr<sub>2</sub>PSeO)<sub>2</sub>H}<sub>2</sub>Pd, is a hydrolysis product with inversion symmetry and contains an intramolecular P—O⋯H—O—P group with a disordered hydrogen atom. Compounds <strong>1</strong>–<strong>6</strong> and <strong>9</strong> show few, if any, short intermolecular contacts, although some H⋯<em>M</em> contacts are observed. A problem with atom-type assignment for structure refinement is discussed.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"81 3","pages":"Pages 183-194"},"PeriodicalIF":0.5000,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11891585/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section E: Crystallographic Communications","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/org/science/article/pii/S2056989025000416","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CRYSTALLOGRAPHY","Score":null,"Total":0}
引用次数: 0
Abstract
Various compounds involving trialkylphosphane chalcogenides (or their derivatives) and palladium or platinum dihalides were structurally characterized and their intra- and intermolecular interactions and metrical parameters were analysed. General comments on the SFAC command are also included.
The L2MX2 complexes 1–5 (1: L = tBuiPr2PSe, M = Pd, X = Cl; 2: L = tBu2iPrPSe, M = Pd, X = Cl; 3: L = tBu2iPrPSe, M = Pd, X = Br; 4: L = tBu2iPrPS, M = Pd, X = Br; 5: L = tBu2iPrPS, M = Pt, X = Cl) {systematic names: (tert-butyldiisopropylphosphine selenide-κSe)dichloridopalladium(II), [PdCl2(C10H23PSe)2] (1), (di-tert-butylisopropylphosphine selenide-κSe)dichloridopalladium(II), [PdCl2(C11H25PSe)2] (2), dibromido(di-tert-butylisopropylphosphine selenide-κSe)palladium(II), [PdBr2(C11H25PSe)2] (3), dibromido(di-tert-butylisopropylphosphine sulfide-κS)palladium(II), [PdBr2(C11H25PS)2] (4), dichlorido(di-tert-butylisopropylphosphine sulfide-κS)palladium(II), [PdCl2(C11H25PS)2] (5)} all display a trans configuration with square-planar geometry at the metal atom. Compounds 2 and 3 are isotypic. The molecules of 1 and 4 display crystallographic inversion symmetry; compound 5 involves two independent molecules, each with inversion symmetry but with differing orientations of the trialkylphosphane groups. Chemically equivalent bond lengths all lie in narrow ranges, whereby the values for palladium and platinum compounds scarcely differ. Compound 6, (tBuiPr2PS)2Pd2Cl4 {systematic name: di-μ-chlorido-bis[(tert-butyldiisopropylphosphine sulfide-κS)chloridopalladium(II)], [PdCl2(C10H23PS)2]}, is dinuclear with a central Pd2Cl2 ring, and displays crystallographic inversion symmetry. The bonds to the bridging are longer than those to the terminal chlorine atoms; the Pd—S bond is shorter than the M—S bonds in 4 and 5, reflecting the weaker trans influence of (bridging) chlorine compared to sulfur. Compounds 7 and 8, 2(tBu2iPrPEBr)+ [Pd2Br6]2− with E = S for 7 and Se for 8 {systematic names: (bromosulfanyl)di-tert-butylisopropylphosphanium di-μ-bromido-bis[dibromidopalladium(II)], (C11H25BrPS)2[Pd2Br6] (7) and (bromoselanyl)di-tert-butylisopropylphosphanium di-μ-bromido-bis[dibromidopalladium(II)], (C11H25BrPS2)2[Pd2Br6], (8)}, were obtained by oxidizing the appropriate PdII precursors with elemental bromine; they are not isotypic. The ions are connected by very short halogen bonds Br⋯Br. For both compounds, two E⋯Br contacts further link the cations and anions to form ribbons. Compound 9 {systematic name: bis[dimethyl(sulfanylidene)phosphinito-κSe]bis(hydroxydiisopropylphosphine selenide-κSe)palladium(II), [Pd(C6H14OP)2(C6H15OP)2], {(iPr2PSeO)2H}2Pd, is a hydrolysis product with inversion symmetry and contains an intramolecular P—O⋯H—O—P group with a disordered hydrogen atom. Compounds 1–6 and 9 show few, if any, short intermolecular contacts, although some H⋯M contacts are observed. A problem with atom-type assignment for structure refinement is discussed.
六种膦硫族化合物R 1 R 2 R 3PE (R =叔丁基或异丙基,E = S或Se)与金属卤化物MX 2 (M = Pd或Pt, X = Cl或Br)、两种卤代醇基磷衍生物(t Bu2 iPrPEBr)2[Pd2Br6]和一种水解产物的配合物的晶体结构。
l2 MX - 2配合物1-5 (1:L = t BuiPr2PSe, M = Pd, X = Cl;2: L = t Bu2 iPrPSe, M = Pd, X = Cl;3: L = t Bu2 iPrPSe, M = Pd, X = Br;4: L = t Bu2 iPrPS, M = Pd, X = Br;5: L = t Bu2 iPrPS, M = Pt, X = Cl){系统名称(叔丁基-二异丙基-硒化膦-κ se)二氯钯(II), [PdCl2(C10H23PSe)2](1),(二叔丁基-异丙基-硒化膦-κ se)二氯钯(II), [PdCl2(C11H25PSe)2](2),二溴-(二叔丁基-异丙基-硒化膦-κ se)钯(II), [PdBr2(C11H25PSe)2](3),二溴-(二叔丁基-异丙基-硫化膦-κ s)钯(II), [PdBr2(C11H25PS)2](4),二氯-(二叔丁基-异丙基-硫化膦-κ s)钯(II), [PdBr2(C11H25PS)2](4),二氯-(二叔丁基-异丙基-硫化膦-κ s)钯(II),[PdCl2(C11H25PS)2](5)}均在金属原子处呈现方形平面的反式构型。化合物2和3是同型的。分子1和分子4表现出晶体反演对称性;化合物5涉及两个独立的分子,每个分子都具有反转对称,但具有三烷基磷化基团的不同取向。化学上相等的键长都在很窄的范围内,因此钯和铂化合物的键长几乎没有差别。化合物6 (t BuiPr2PS)2Pd2Cl4{系统名称:di-μ-氯-双-[(叔丁基二异丙基硫化氢-κ s)氯-钯(II)], [PdCl2(C10H23PS)2]}是一个中心有Pd2Cl2环的双核化合物,具有晶体反演对称性。桥接键的键比末端氯原子的键长;4和5中的Pd-S键比M-S键短,反映了(桥接)氯对反式的影响比硫弱。化合物7和8,2 (t Bu2 iPrPEBr)+ [Pd2Br6]2- (E = S = 7, Se = 8){系统名称:(溴磺基)二叔丁基异丙基磷二μ溴-双-[二溴-钯(II)], (C11H25BrPS)2[Pd2Br6](7)和(溴selan-yl)二叔丁基异丙基磷二μ溴-双-[二溴-钯(II)], (C11H25BrPS2)2[Pd2Br6], (8)};它们不是同型的。离子由非常短的卤素键Br⋯Br连接。对于这两种化合物,两个E⋯Br触点进一步连接阳离子和阴离子以形成带状。化合物9{系统名称:双-[二甲基(磺胺基)磷酸基-κ se]双-(羟基-二异丙基-硒化膦-κ se)钯(II), [Pd(C6H14OP)2(C6H15OP)2], {(iPr2PSeO)2H}2Pd,是一种可逆对称的水解产物,其分子内含有一个带有无序氢原子的P-O⋯H-O-P基团。化合物1-6和9显示很少(如果有的话)短的分子间接触,尽管观察到一些H⋯M接触。讨论了结构精化的原子型赋值问题。
期刊介绍:
Acta Crystallographica Section E: Crystallographic Communications is the IUCr''s open-access structural communications journal. It provides a fast, simple and easily accessible publication mechanism for crystal structure determinations of inorganic, metal-organic and organic compounds. The electronic submission, validation, refereeing and publication facilities of the journal ensure rapid and high-quality publication of fully validated structures. The primary article category is Research Communications; these are peer-reviewed articles describing one or more structure determinations with appropriate discussion of the science.