Prediction of preoperative tumor-related epilepsy using XGBoost radiomics models with 4 MRI sequences.

IF 1.3 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Reuben George, Li Sze Chow, Kheng Seang Lim, Norlisah Ramli, Li Kuo Tan, Mahmud Iwan Solihin
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引用次数: 0

Abstract

Introduction. Tumor-related epilepsy is a prevalent condition in patients with gliomas. Accurate prediction of epilepsy is crucial for early treatment. This study aimed to evaluate the novel application of the eXtreme Gradient Boost (XGBoost) machine learning (ML) algorithm into a radiomics model predicting preoperative tumor-related epilepsy (PTRE). Its performance was compared with 4 conventional ML algorithms, including the least absolute shrinkage and selection operator (LASSO), elastic net, random forest, and support vector machine.Methods.This study used four magnetic resonance imaging (MRI) images consisting of four sequences (T1-weighted [T1W], T1-weighted contrast [T1WC], T2-weighted [T2W], and T2-weighted fluid-attenuated inversion recovery [T2W FLAIR]) acquired from 74 glioma patients, 30 with PTRE and 44 without PTRE. 394 radiomics features were extracted from the MRI scans usingPyradiomics, alongside 12 clinical features from the medical records. The ML algorithms were mixed and matched to create 20 radiomics models with two stages for: (1) feature selection and (2) prediction of PTRE. Nested cross-validation was used to tune the algorithms and select the stable features.Results.The XGBoost radiomics model demonstrated the second-highest balanced accuracy and F1-score of 0.81 ± 0.01 and 0.80 ± 0.01 respectively. It also achieved the highest recall of 0.81 ± 0.02. It used mostly textural radiomics features from the T1W, T2W and T2W FLAIR sequences to make the predictions.Conclusion.This study demonstrates that XGBoost is a viable alternative to conventional ML algorithms for developing a radiomics model to predict PTRE, as the model produced from XGBoost had among the highest metrics. XGBoost selected features with a higher predictive value than other models. The features selected by XGBoost were more stable, which is a useful property for radiomics analysis. Features selected from multiple MRI sequences were important in the model's decision.

利用XGBoost放射组学模型和4个MRI序列预测术前肿瘤相关性癫痫。
肿瘤相关性癫痫是神经胶质瘤患者的常见病。准确预测癫痫对早期治疗至关重要。本研究旨在评估极端梯度增强(XGBoost)机器学习(ML)算法在预测术前肿瘤相关性癫痫(PTRE)的放射组学模型中的新应用。将其性能与最小绝对收缩和选择算子(LASSO)、弹性网、随机森林和支持向量机等4种传统机器学习算法进行了比较。方法:本研究使用74例胶质瘤患者的4张磁共振成像(MRI)图像,包括4个序列(t1加权[T1W]、t1加权对比[T1WC]、t2加权[T2W]和t2加权液体衰减反转恢复[T2W FLAIR]),其中30例有PTRE, 44例无PTRE。利用放射组学从MRI扫描中提取了394个放射组学特征,并从医疗记录中提取了12个临床特征。将ML算法混合匹配,创建20个放射组学模型,分为两个阶段:(1)特征选择和(2)PTRE预测。采用嵌套交叉验证对算法进行优化,选择稳定特征。结果:XGBoost放射组学模型具有第二高的平衡精度和f1评分,分别为0.81±0.01和0.80±0.01。召回率最高,为0.81±0.02。它主要使用来自T1W, T2W和T2W FLAIR序列的纹理放射组学特征进行预测。结论:该研究表明,XGBoost是传统ML算法开发放射组学模型预测PTRE的可行替代方案,因为由XGBoost生成的模型具有最高的指标。XGBoost选择的特征具有比其他模型更高的预测值。XGBoost选择的特征更稳定,这是放射组学分析的有用特性。从多个MRI序列中选择的特征对模型的决策很重要。
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来源期刊
Biomedical Physics & Engineering Express
Biomedical Physics & Engineering Express RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
2.80
自引率
0.00%
发文量
153
期刊介绍: BPEX is an inclusive, international, multidisciplinary journal devoted to publishing new research on any application of physics and/or engineering in medicine and/or biology. Characterized by a broad geographical coverage and a fast-track peer-review process, relevant topics include all aspects of biophysics, medical physics and biomedical engineering. Papers that are almost entirely clinical or biological in their focus are not suitable. The journal has an emphasis on publishing interdisciplinary work and bringing research fields together, encompassing experimental, theoretical and computational work.
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