N R Kokila, B Mahesh, Ramith Ramu, S G Divakara, K Mruthunjaya, Neera Raghav, Thippeswamy Boreddy Shivanandappa
{"title":"Combined <i>in vitro</i> and <i>in silico</i> approach to define alangimarckine from <i>Thunbergia mysorensis</i> leaves as a potential inhibitor of α-glucosidase.","authors":"N R Kokila, B Mahesh, Ramith Ramu, S G Divakara, K Mruthunjaya, Neera Raghav, Thippeswamy Boreddy Shivanandappa","doi":"10.1080/07391102.2025.2472396","DOIUrl":null,"url":null,"abstract":"<p><p>The current work investigated biocomputational methodologies for α-glucosidase inhibition to examine the antidiabetic potential of methanolic extract of <i>T. mysorensis</i> leaves (MeL). MeL intensely impeded yeast-glucosidase, which is vital for treating postprandial hyperglycemia (IC<sub>50</sub> = 5.76 ± 0.10 μg/mL) in comparison to an acarbose control (IC<sub>50</sub> = 7.98 ± 0.23 μg/mL). The MeL is affected by phytochemical profiling employing LC-MS, GC-MS, and HPLC analysis to determine the bioactive components responsible for the antidiabetic activity. The specified phytocompounds were employed <i>in silico</i> research following the bioactive profiling, where they were docked into the inhibitor binding site of α-glucosidase. Molecular docking simulations, molecular dynamics simulations, and binding free energy inquiries were utilized <i>in silico</i> research to clarify the mechanism by which <i>T. mysorensis</i> phytocompounds block α-glucosidase. Alangimarckine is a glucocorticoid that is used to treat nasal symptoms. Alangimarckine inhibited the target enzyme with greater binding efficiency (-9.7 kcal/mol) than the acarbose control (-8.6 kcal/mol) during molecular docking. Concerning molecular dynamics simulation studies, Alangimarckine-α-glucosidase complex was found to be stable inside the inhibitor binding site of the protein, compared to the acarbose -α-glucosidase complex. Additionally, alangimarckine inhibited α-glucosidase at IC<sub>50</sub> = 5.32 ± 0.19 μg/mL during <i>in vitro</i> inhibition of α-glucosidase, which was efficient in comparison to both MeL and acarbose. Therefore, our research suggests that alangimarckine and MeL from <i>T. mysorensis</i> may function as potent antidiabetic medications. Alangimarckine could be used in <i>in vivo</i> and clinical investigations to specify its antidiabetic properties that target α-glucosidase inhibition.</p>","PeriodicalId":15272,"journal":{"name":"Journal of Biomolecular Structure & Dynamics","volume":" ","pages":"1-20"},"PeriodicalIF":2.7000,"publicationDate":"2025-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomolecular Structure & Dynamics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/07391102.2025.2472396","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
The current work investigated biocomputational methodologies for α-glucosidase inhibition to examine the antidiabetic potential of methanolic extract of T. mysorensis leaves (MeL). MeL intensely impeded yeast-glucosidase, which is vital for treating postprandial hyperglycemia (IC50 = 5.76 ± 0.10 μg/mL) in comparison to an acarbose control (IC50 = 7.98 ± 0.23 μg/mL). The MeL is affected by phytochemical profiling employing LC-MS, GC-MS, and HPLC analysis to determine the bioactive components responsible for the antidiabetic activity. The specified phytocompounds were employed in silico research following the bioactive profiling, where they were docked into the inhibitor binding site of α-glucosidase. Molecular docking simulations, molecular dynamics simulations, and binding free energy inquiries were utilized in silico research to clarify the mechanism by which T. mysorensis phytocompounds block α-glucosidase. Alangimarckine is a glucocorticoid that is used to treat nasal symptoms. Alangimarckine inhibited the target enzyme with greater binding efficiency (-9.7 kcal/mol) than the acarbose control (-8.6 kcal/mol) during molecular docking. Concerning molecular dynamics simulation studies, Alangimarckine-α-glucosidase complex was found to be stable inside the inhibitor binding site of the protein, compared to the acarbose -α-glucosidase complex. Additionally, alangimarckine inhibited α-glucosidase at IC50 = 5.32 ± 0.19 μg/mL during in vitro inhibition of α-glucosidase, which was efficient in comparison to both MeL and acarbose. Therefore, our research suggests that alangimarckine and MeL from T. mysorensis may function as potent antidiabetic medications. Alangimarckine could be used in in vivo and clinical investigations to specify its antidiabetic properties that target α-glucosidase inhibition.
期刊介绍:
The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.