Domain knowledge based comprehensive segmentation of Type-A aortic dissection with clinically-oriented evaluation

IF 10.7 1区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Shanshan Song , Hailong Qiu , Meiping Huang , Jian Zhuang , Qing Lu , Yiyu Shi , Xiaomeng Li , Wen Xie , Guang Tong , Xiaowei Xu
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引用次数: 0

Abstract

Type-A aortic dissection (TAAD) is a cardiac emergency in which rapid diagnosis, prognosis prediction, and surgical planning are critical for patient survival. A comprehensive understanding of the anatomic structures and related features of TAAD patients is the key to completing these tasks. However, due to the emergent nature of this disease and requirement of advanced expertise, manual segmentation of these anatomic structures is not routinely available in clinical practice. Currently, automatic segmentation of TAAD is a focus of the cardiovascular imaging research. However, existing works have two limitations: no comprehensive public dataset and lack of clinically-oriented evaluation. To address these limitations, in this paper we propose imageTAAD, the first comprehensive segmentation dataset of TAAD with clinically-oriented evaluation. The dataset is comprised of 120 cases, and each case is annotated by medical experts with 35 foreground classes reflecting the clinical needs for diagnosis, prognosis prediction and surgical planning for TAAD. In addition, we have identified four key clinical features for clinically-oriented evaluation. We also propose SegTAAD, a baseline method for comprehensive segmentation of TAAD. SegTAAD utilizes two pieces of domain knowledge: (1) the boundaries play a key role in the evaluation of clinical features, and can enhance the segmentation performance, and (2) the tear is located between TL and FL. We have conducted intensive experiments with a variety of state-of-the-art (SOTA) methods, and experimental results have shown that our method achieves SOTA performance on the ImageTAAD dataset in terms of overall DSC score, 95% Hausdorff distance, and four clinical features. In our study, we also found an interesting phenomenon that a higher DSC score does not necessarily indicate better accuracy in clinical feature extraction. All the dataset, code and trained models have been published (Xiaowei, 2024).
基于领域知识的a型主动脉夹层综合分割及临床评价
a型主动脉夹层(TAAD)是一种心脏急症,快速诊断、预后预测和手术计划对患者的生存至关重要。全面了解TAAD患者的解剖结构及相关特征是完成这些任务的关键。然而,由于这种疾病的突发性和对高级专业知识的要求,这些解剖结构的人工分割在临床实践中并不常见。目前,TAAD的自动分割是心血管成像研究的一个热点。然而,现有的工作有两个局限性:没有全面的公共数据集和缺乏临床导向的评估。为了解决这些限制,本文提出了imageTAAD,这是第一个具有临床导向评估的TAAD综合分割数据集。该数据集由120例病例组成,每个病例由医学专家注释35个前景类,反映了TAAD的诊断、预后预测和手术计划的临床需求。此外,我们已经确定了临床导向评估的四个关键临床特征。我们还提出了SegTAAD,这是一种综合分割TAAD的基线方法。SegTAAD利用了两个领域知识:(1)边界在临床特征评估中起着关键作用,可以增强分割性能;(2)撕裂位于TL和FL之间。我们用各种最先进的(SOTA)方法进行了大量实验,实验结果表明,我们的方法在ImageTAAD数据集上在总体DSC评分、95% Hausdorff距离和四个临床特征方面都达到了SOTA性能。在我们的研究中,我们还发现了一个有趣的现象,即DSC分数越高并不一定意味着临床特征提取的准确性越高。所有数据集、代码和训练模型都已发布(Xiaowei, 2024)。
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来源期刊
Medical image analysis
Medical image analysis 工程技术-工程:生物医学
CiteScore
22.10
自引率
6.40%
发文量
309
审稿时长
6.6 months
期刊介绍: Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.
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