{"title":"First Principles Global Optimization Method From Parallel Tempering Molecular Dynamics","authors":"Gerald Geudtner, Andreas M. Köster","doi":"10.1002/jcc.70057","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Global optimization techniques are often based on a stochastic method to explore the potential energy surface of the investigated system. The here-described global optimization is based on a temperature-driven potential energy surface exploration via Parallel Tempering Born-Oppenheimer Molecular Dynamics (PT-BOMD) simulations. Additionally, structure selection from the lowest temperature PT-BOMD trajectory for further optimization is performed with a scheme based on the Discrete Cosine Transformation (DCT). This step can be done automatically and therefore removes a human bias. The influence of parameters for the DCT and the length of the PT-BOMD simulations is investigated with regard to their impact on the result of the global optimization.</p>\n </div>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":"46 6","pages":""},"PeriodicalIF":3.4000,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computational Chemistry","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/jcc.70057","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Global optimization techniques are often based on a stochastic method to explore the potential energy surface of the investigated system. The here-described global optimization is based on a temperature-driven potential energy surface exploration via Parallel Tempering Born-Oppenheimer Molecular Dynamics (PT-BOMD) simulations. Additionally, structure selection from the lowest temperature PT-BOMD trajectory for further optimization is performed with a scheme based on the Discrete Cosine Transformation (DCT). This step can be done automatically and therefore removes a human bias. The influence of parameters for the DCT and the length of the PT-BOMD simulations is investigated with regard to their impact on the result of the global optimization.
期刊介绍:
This distinguished journal publishes articles concerned with all aspects of computational chemistry: analytical, biological, inorganic, organic, physical, and materials. The Journal of Computational Chemistry presents original research, contemporary developments in theory and methodology, and state-of-the-art applications. Computational areas that are featured in the journal include ab initio and semiempirical quantum mechanics, density functional theory, molecular mechanics, molecular dynamics, statistical mechanics, cheminformatics, biomolecular structure prediction, molecular design, and bioinformatics.