Association of CDK8 Gene Polymorphisms with Cervical Cancer in Han Women in Southwest China.

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY
Su Min, Qin Li, Zhilong Li, Hongxiao Huang, Xuelian Zheng, Yaping Song, Zhishan Ye, Zhichen Tang, Bin Zhou, Tianyu Li, Yanyun Wang
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Abstract

Background: Cervical cancer (CC) is the most prevalent gynecological tumor among women. Cyclin-dependent kinase 8 (CDK8), which plays a crucial role in cellular transcriptional processes and various signaling pathways, has been identified as a key oncogenic factor in numerous cancers. However, limited data exists on the correlation between CDK8 and CC. The objective of our study was to investigate whether there is an association between CDK8 gene polymorphisms and the development of CC in Han women from Southwest China. Materials and methods: A total of 300 unrelated CC patients and 335 healthy controls from Southwest China were included in the study. The polymerase chain reaction-restriction fragment length polymorphism analysis was used to genotype the two tag single nucleotide polymorphisms (SNPs) of CDK8 gene (rs17083838 and rs7992670), and the relationship between the two tag SNPs and CC incidence was analyzed by SNPstats software. Multifactor dimensionality reduction (MDR) was used to analyze the interaction of multiple polymorphisms of the CDK8 gene. The false-positive report probability (FPRP) was used to verify the effective correlation. Results: The frequency of the A allele of CDK8 rs17083838 in the CC group was significantly higher than that in the control group (25% vs. 12%, p < 0.0001, odds ratio (OR): 0.42, 95% confidence intervals [CI]: 0.31-0.58). The frequency of the A allele at rs7992670 was higher in the CC group than that in the control group (52% vs. 45%, p = 0.026, OR: 0.78, 95% CI: 0.63-0.97). MDR analysis showed that rs17083838 and rs7992670 as the overall model was the best model, the detection accuracy was 0.6157, and the cross-validation consistency was 10/10 (p < 0.0001). In addition, 22 valid FRPR values were verified by using the FPRP detection method. Conclusion: The two SNPs of the CDK8 gene may be associated with the increased risk of CC in the Han population in Southwest China.

CDK8基因多态性与中国西南汉族妇女宫颈癌的关系
背景:宫颈癌是女性最常见的妇科肿瘤。细胞周期蛋白依赖性激酶8 (Cyclin-dependent kinase 8, CDK8)在细胞转录过程和各种信号通路中起着至关重要的作用,已被确定为许多癌症的关键致癌因子。然而,CDK8与CC之间的相关性数据有限,我们的研究目的是探讨CDK8基因多态性与中国西南汉族女性CC的发展之间是否存在关联。材料与方法:来自中国西南地区的300例非相关CC患者和335名健康对照者被纳入研究。采用聚合酶链反应-限制性片段长度多态性分析对CDK8基因rs17083838和rs7992670两个标签单核苷酸多态性(snp)进行基因分型,并利用SNPstats软件分析这两个标签snp与CC发病率的关系。采用多因子降维(MDR)分析CDK8基因多个多态性的相互作用。采用假阳性报告概率(FPRP)验证有效相关性。结果:CC组CDK8 rs17083838 A等位基因频率显著高于对照组(25% vs. 12%, p < 0.0001,优势比(OR): 0.42, 95%可信区间[CI]: 0.31-0.58)。CC组rs7992670位点A等位基因的频率高于对照组(52% vs. 45%, p = 0.026, OR: 0.78, 95% CI: 0.63-0.97)。MDR分析显示,rs17083838和rs7992670作为整体模型为最佳模型,检测准确率为0.6157,交叉验证一致性为10/10 (p < 0.0001)。此外,利用FPRP检测方法验证了22个有效的FRPR值。结论:CDK8基因的两个snp可能与中国西南汉族人群CC风险增加有关。
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来源期刊
CiteScore
2.50
自引率
7.10%
发文量
63
审稿时长
1 months
期刊介绍: Genetic Testing and Molecular Biomarkers is the leading peer-reviewed journal covering all aspects of human genetic testing including molecular biomarkers. The Journal provides a forum for the development of new technology; the application of testing to decision making in an increasingly varied set of clinical situations; ethical, legal, social, and economic aspects of genetic testing; and issues concerning effective genetic counseling. This is the definitive resource for researchers, clinicians, and scientists who develop, perform, and interpret genetic tests and their results. Genetic Testing and Molecular Biomarkers coverage includes: -Diagnosis across the life span- Risk assessment- Carrier detection in individuals, couples, and populations- Novel methods and new instrumentation for genetic testing- Results of molecular, biochemical, and cytogenetic testing- Genetic counseling
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