Screening Co-Diagnostic Genes for Lung Adenocarcinoma and Myocardial Infarction and Analysis of the Molecular Functions and Drug Value of the Genes.

IF 2
Nannan Du, Mengting Liang, Zongjun Liu
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Abstract

Background: Lung adenocarcinoma (LUAD) is the most common subtype of non-small cell lung cancer, and myocardial infarction (MI) is an acute cardiovascular disease resulting from the disruption of coronary blood supply. Recent studies have suggested that these two diseases may share common molecular mechanisms.

Aim: The aim of this study was to discover common diagnostic genes for LUAD and MI and analyze their molecular functions and potential drug values by applying bioinformatics analysis.

Objective: The objective was to provide a theoretical basis for further research on the pathological mechanisms of LUAD and MI, contributing to the development of novel diagnostic and therapeutic strategies for the two diseases.

Methods: In this study, the datasets of LUAD and MI were obtained from TCGA and GEO databases, and differential expression analysis was performed to screen significantly differentially expressed genes (DEGs). Subsequently, disease-related genes were identified using WGCNA analysis, and the biological functions of these genes were explored by functional enrichment analysis. After screening key genes using the protein-protein interaction (PPI) network and the cytoHubba algorithm, biomarkers were determined by LASSO and SVM-RFE machine-learning methods. Finally, immune infiltration analysis and drug prediction were performed, and biomarker expression was verified by single-cell sequencing analysis.

Results: A total of 158 differentially upregulated genes were identified between LUAD and MI. WGCNA analysis screened 86 genes that were significantly associated with both diseases and were enriched in an inflammatory response and immune regulation-related pathways, such as the IL-17 signaling pathway. Ten significant genes were identified by the PPI network and cytoHubba and then reduced to 4 using LASSO and SVM-RFE. Noticeably, MMP9 was significantly overexpressed in both diseases. Immune infiltration analysis showed that MMP9 was significantly related to multiple immune cell infiltration. Drug prediction and molecular docking analysis predicted Ilomastat and Osthole as the potential target drugs. Single-cell sequencing analysis revealed that MMP9 was high-expressed in the macrophages in LUAD tissues.

Conclusion: This study identified MMP9 as a common diagnostic gene and potential therapeutic target for both LUAD and MI and revealed its role in inflammation and immune regulation through comprehensive bioinformatics analysis. These findings provided a theoretical basis for further research on the pathological mechanisms of LUAD and MI, contributing to the development of novel diagnostic and therapeutic strategies.

肺腺癌和心肌梗死共诊断基因的筛选及其分子功能和药物价值分析。
背景:肺腺癌(LUAD)是非小细胞肺癌中最常见的亚型,而心肌梗死(MI)是由冠状动脉供血中断引起的急性心血管疾病。最近的研究表明,这两种疾病可能具有共同的分子机制。目的:通过生物信息学分析,发现LUAD和MI的常见诊断基因,分析其分子功能和潜在的药物价值。目的:为进一步研究LUAD和MI的病理机制提供理论依据,为这两种疾病的新诊断和治疗策略的发展做出贡献。方法:本研究从TCGA和GEO数据库中获取LUAD和MI数据集,进行差异表达分析,筛选显著差异表达基因(DEGs)。随后,利用WGCNA分析鉴定疾病相关基因,并通过功能富集分析探索这些基因的生物学功能。利用蛋白-蛋白相互作用(PPI)网络和cytoHubba算法筛选关键基因后,利用LASSO和SVM-RFE机器学习方法确定生物标志物。最后进行免疫浸润分析和药物预测,并通过单细胞测序分析验证生物标志物的表达。结果:在LUAD和MI之间共鉴定出158个差异上调基因。WGCNA分析筛选出86个与这两种疾病显著相关的基因,这些基因在炎症反应和免疫调节相关途径(如IL-17信号通路)中富集。通过PPI网络和cytoHubba鉴定出10个显著基因,然后通过LASSO和SVM-RFE减少到4个。值得注意的是,MMP9在两种疾病中均显著过表达。免疫浸润分析显示,MMP9与多种免疫细胞浸润有显著相关性。药物预测和分子对接分析预测伊洛马司他和蛇床素是潜在的靶标药物。单细胞测序分析显示,MMP9在LUAD组织巨噬细胞中高表达。结论:本研究发现MMP9是LUAD和MI的共同诊断基因和潜在治疗靶点,并通过综合生物信息学分析揭示了其在炎症和免疫调节中的作用。这些发现为进一步研究LUAD和MI的病理机制提供了理论基础,有助于开发新的诊断和治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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