Deciphering the role of molecular mimicry in the etiopathogenesis of Autoimmune Hemolytic Anemia using an immunoinformatics approach.

Pratyusha Patidar , Arihant Jain , Tulika Prakash
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Abstract

Autoimmune hemolytic anemia (AIHA) is a chronic autoimmune disease characterized by the self-destruction of red blood cells (RBCs). For investigating the role molecular mimicry in the onset of AIHA manifestations, we identified the microbial epitopes as precipitating factors in the disease etiopathology using an integrated immunoinformatics pipeline which includes sequence homology search between microbial and RBC proteins, followed by B-cell and T-cell epitope prediction. These epitopes were further subjected to a homology search with the human gut microbial proteins. Eight out of the ten analysed infectious agents, including Hepatitis C Virus (HCV), Cytomegalovirus (CMV), Epstein-Barr Virus (EBV), Herpes Simplex Virus (HSV), Human Papillomavirus (HPV), Human Immunodeficiency Virus (HIV), Mycoplasma pneumoniae (MP), and Treponema pallidum (TP), possessed B-cell and T-cell epitopes. Interestingly, EBV, HSV, MP, and TP displayed conformational B-cell epitopes, which overlapped with their linear B-cell epitopes. HLA DRB1_0305 was found to exhibit binding with several bacterial epitopes indicating its predisposing potential to AIHA. Further, we report cross-reactive microbial epitopes against RBC proteins that have been experimentally proven to be associated with AIHA indicating a high possibility of those epitopes causing AIHA. Additionally, many B-cell and T-cell epitopes exhibited exact homologies with various human gut microbial proteins. The functional annotation highlighted the involvement of specialized RBC functions, such as cytoskeleton organization, ammonium homeostasis, signalling transduction, in the underlying disease mechanism. These findings suggest that infection-causing pathogens and gut microbes might have a plausible association with AIHA in the context of molecular mimicry.

Abstract Image

利用免疫信息学方法解读自身免疫性溶血性贫血发病机制中的分子模拟作用。
自身免疫性溶血性贫血(AIHA)是一种以红细胞(rbc)自我破坏为特征的慢性自身免疫性疾病。为了研究分子模仿在AIHA发病中的作用,我们使用综合免疫信息学管道确定微生物表位是疾病病因病理学的沉淀因素,其中包括微生物和RBC蛋白之间的序列同源性搜索,然后是b细胞和t细胞表位预测。这些表位进一步与人类肠道微生物蛋白进行同源性搜索。在分析的10种感染因子中,有8种具有b细胞和t细胞表位,包括丙型肝炎病毒(HCV)、巨细胞病毒(CMV)、eb病毒(EBV)、单纯疱疹病毒(HSV)、人乳头瘤病毒(HPV)、人类免疫缺陷病毒(HIV)、肺炎支原体(MP)和梅毒体(TP)。有趣的是,EBV、HSV、MP和TP显示构象b细胞表位,与它们的线性b细胞表位重叠。发现HLA DRB1_0305与几种细菌表位结合,表明其易患AIHA。此外,我们报道了抗红细胞蛋白的交叉反应性微生物表位,这些表位已被实验证明与AIHA相关,这表明这些表位极有可能引起AIHA。此外,许多b细胞和t细胞表位与各种人类肠道微生物蛋白具有精确的同源性。功能注释强调了特殊的红细胞功能,如细胞骨架组织、铵态平衡、信号转导,在潜在的疾病机制中的参与。这些发现表明,在分子拟态的背景下,引起感染的病原体和肠道微生物可能与AIHA有似是而非的关联。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Immunoinformatics (Amsterdam, Netherlands)
Immunoinformatics (Amsterdam, Netherlands) Immunology, Computer Science Applications
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