Structural transformation in Pd nanoclusters induced by Cu doping: an ADFT study

IF 2.1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
L. Santiago-Silva, H. Cruz-Martínez, H. Rojas-Chávez, L. López-Sosa, P. Calaminici
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引用次数: 0

Abstract

Context

Transition metal nanoparticles have gained great importance due to their promising applications in various fields such as energy, electronics, medicine, and agriculture. For these applications, materials with outstanding properties are currently required. Therefore, different strategies have been established to improve the properties of pure nanoparticles such as alloying, doping, and formation of composites. Among these strategies, doping is gaining great importance because it has been demonstrated that doped nanoparticles have better properties than pure nanoparticles. Therefore, it is essential to know the role of doping on the structures and properties of clusters with more than 16 atoms. Consequently, in this study, we propose a theoretical study of structures and properties focusing on pure Pd19, Cu-doped Pd18 (Pd18Cu), and Cu2-doped Pd17 (Pd17Cu2) nanoclusters and thus elucidate the role of Cu atoms on the structures and properties of larger doped Pd nanoclusters than those already presented in the literature. We have selected a nanocluster with 19 atoms since the most stable structure of this system is characterized by defined shapes such as octahedron or double-icosahedron.

Methods

Ground state structures and properties of Pd19, Pd18Cu, and Pd17Cu2 nanoclusters were studied using the auxiliary density functional theory (ADFT), as implemented in the deMon2k code. For obtaining the ground state structures of Pd19, Pd18Cu, and Pd17Cu2 nanoclusters, several dozen initial structures were taken along Born–Oppenheimer molecular dynamics (BOMD) trajectories and subsequently optimized without symmetry restrictions. The optimizations were performed with the revised PBE functional in combination with TZVP-GGA for the Cu atoms and using an 18-electron QECP|SD basis set for the Pd atoms. Different energetic and electronic properties were calculated for the most stable structures of Pd19, Pd18Cu, and Pd17Cu2 nanoclusters. Interestingly, when the Pd nanocluster is doped with two Cu atoms (Pd17Cu2), there is a structural transition, because the most stable structures for Pd19 and Pd18Cu are icosahedral. While the Pd17Cu nanocluster is characterized for a double-icosahedral-base structure. The binding energy per atom increases when the Cu concentration in the nanoclusters increases. According to the HOMO–LUMO gap, the chemical reactivity of the nanoclusters tends to increase as the Cu content in the nanoclusters increases.

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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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