MBST-Driven 4D-CBCT reconstruction: Leveraging swin transformer and masking for robust performance

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Nannan Cao , Qilin Li , Kangkang Sun , Heng Zhang , Jiangyi Ding , Ziyi Wang , Wei Chen , Liugang Gao , Jiawei Sun , Kai Xie , Xinye Ni
{"title":"MBST-Driven 4D-CBCT reconstruction: Leveraging swin transformer and masking for robust performance","authors":"Nannan Cao ,&nbsp;Qilin Li ,&nbsp;Kangkang Sun ,&nbsp;Heng Zhang ,&nbsp;Jiangyi Ding ,&nbsp;Ziyi Wang ,&nbsp;Wei Chen ,&nbsp;Liugang Gao ,&nbsp;Jiawei Sun ,&nbsp;Kai Xie ,&nbsp;Xinye Ni","doi":"10.1016/j.cmpb.2025.108637","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective</h3><div>This research developed an innovative Mask-based Swin Transformer network (MBST) to enhance the quality of 4D cone-beam computed tomography (4D-CBCT) reconstruction. The network is trained on 4D-CBCT reconstructed under limited scanning conditions, enabling its application to a broad range of 4D-CBCT reconstruction scenarios, including those with high scanning speeds.</div></div><div><h3>Methods</h3><div>4D imaging data from 20 patients with thoracic tumors were used to train and evaluate the deep learning model. 15 cases were used for training, and 5 cases were employed for simulation testing. The Feldkamp–Davis–Kress algorithm was employed to simulate 4D-CBCT from downsampled 4D-CT data to mitigate the uncertainties associated with respiratory motion between treatment fractions, and the 4D-CT data served as the ground truth for training. The study reconstructed 4D-CBCT images under 11 different scanning intervals including full angle acquisition at 1°, 2°, 3°, 4°, 5°, 6°, 12°, 18°, 24° intervals, and 1/3 full angles acquisition at 5°, 10° inrevals respectively for capturing 4D-CBCT projections. The test results were quantitatively evaluated using the structural similarity index measure (SSIM), peak signal-to-noise ratio (PSNR), mean error (ME), and mean absolute error (MAE), and image quality was qualitatively assessed. Real clinical patients who were not included in the training were tested to evaluate the network's ability to generalize. Moreover, the proposed method was compared with other deep learning approaches, and statistical analyses were performed.</div></div><div><h3>Results</h3><div>Simulation data assessment revealed that with small projection acquisition interval, such as the 4°interval, the 4D-CBCT images optimized by MBST showed a considerable improvement over the original 4D-CBCT images in terms of SSIM (42.3% increase) and PSNR (10.8 dB increase), and the ME and MAE values approached 0. The improvements were statistically significant (<em>P</em> &lt; 0.001). Compared with other deep learning methods, MBST demonstrated superior performance with improvements of 1.4% in SSIM and 1.21 dB in PSNR and a reduction of 0.94 in MAE. With large projection intervals, such as the 24°interval, MBST outperformed other deep learning methods. Specifically, its SSIM, PSNR, and MAE increased by 3.8%, 0.81 dB, and 10.34, respectively, compared with those of other deep learning methods, and the improvements were statistically significant (P &lt; 0.01). In addition, MBST could reconstruct bone tissue and optimize the quality of 4D-CBCT images even when the number of projections was small (12°, 18°, 24°intervals). Clinical data evaluation revealed that after optimization by MBST, the SSIM, PSNR, ME, and MAE of 4D-CBCT compared with those of 4D-CT registration improved from the original 22.8%, 15.49 dB, −345.5, and 432.2 to 81.5%, 27.93 dB, −53.79, and 73.77, respectively. Moreover, MBST exhibited the most pronounced improvement among all the compared methods. MBST could accurately recover high-density structure, lung structures, and tracheal walls.</div></div><div><h3>Conclusion</h3><div>This study comprehensively demonstrated the ability of MBST to reconstruct 4D-CBCT images under various scanning conditions. When the method was tested on clinical patient datasets, its CT values and image quality achieved satisfactory results. Thus, MBST can serve as a highly generalized reconstruction network for improving the quality of 4D-CBCT images.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"262 ","pages":"Article 108637"},"PeriodicalIF":4.9000,"publicationDate":"2025-02-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260725000549","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

Abstract

Objective

This research developed an innovative Mask-based Swin Transformer network (MBST) to enhance the quality of 4D cone-beam computed tomography (4D-CBCT) reconstruction. The network is trained on 4D-CBCT reconstructed under limited scanning conditions, enabling its application to a broad range of 4D-CBCT reconstruction scenarios, including those with high scanning speeds.

Methods

4D imaging data from 20 patients with thoracic tumors were used to train and evaluate the deep learning model. 15 cases were used for training, and 5 cases were employed for simulation testing. The Feldkamp–Davis–Kress algorithm was employed to simulate 4D-CBCT from downsampled 4D-CT data to mitigate the uncertainties associated with respiratory motion between treatment fractions, and the 4D-CT data served as the ground truth for training. The study reconstructed 4D-CBCT images under 11 different scanning intervals including full angle acquisition at 1°, 2°, 3°, 4°, 5°, 6°, 12°, 18°, 24° intervals, and 1/3 full angles acquisition at 5°, 10° inrevals respectively for capturing 4D-CBCT projections. The test results were quantitatively evaluated using the structural similarity index measure (SSIM), peak signal-to-noise ratio (PSNR), mean error (ME), and mean absolute error (MAE), and image quality was qualitatively assessed. Real clinical patients who were not included in the training were tested to evaluate the network's ability to generalize. Moreover, the proposed method was compared with other deep learning approaches, and statistical analyses were performed.

Results

Simulation data assessment revealed that with small projection acquisition interval, such as the 4°interval, the 4D-CBCT images optimized by MBST showed a considerable improvement over the original 4D-CBCT images in terms of SSIM (42.3% increase) and PSNR (10.8 dB increase), and the ME and MAE values approached 0. The improvements were statistically significant (P < 0.001). Compared with other deep learning methods, MBST demonstrated superior performance with improvements of 1.4% in SSIM and 1.21 dB in PSNR and a reduction of 0.94 in MAE. With large projection intervals, such as the 24°interval, MBST outperformed other deep learning methods. Specifically, its SSIM, PSNR, and MAE increased by 3.8%, 0.81 dB, and 10.34, respectively, compared with those of other deep learning methods, and the improvements were statistically significant (P < 0.01). In addition, MBST could reconstruct bone tissue and optimize the quality of 4D-CBCT images even when the number of projections was small (12°, 18°, 24°intervals). Clinical data evaluation revealed that after optimization by MBST, the SSIM, PSNR, ME, and MAE of 4D-CBCT compared with those of 4D-CT registration improved from the original 22.8%, 15.49 dB, −345.5, and 432.2 to 81.5%, 27.93 dB, −53.79, and 73.77, respectively. Moreover, MBST exhibited the most pronounced improvement among all the compared methods. MBST could accurately recover high-density structure, lung structures, and tracheal walls.

Conclusion

This study comprehensively demonstrated the ability of MBST to reconstruct 4D-CBCT images under various scanning conditions. When the method was tested on clinical patient datasets, its CT values and image quality achieved satisfactory results. Thus, MBST can serve as a highly generalized reconstruction network for improving the quality of 4D-CBCT images.

Abstract Image

求助全文
约1分钟内获得全文 求助全文
来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信