{"title":"PDE-LDDMM meets NODEs: Introducing neural ordinary differential equation solvers in PDE-constrained Large Deformation Diffeomorphic Metric Mapping","authors":"Monica Hernandez","doi":"10.1016/j.jocs.2024.102507","DOIUrl":null,"url":null,"abstract":"<div><div>Non-rigid image registration is a crucial task in various medical applications, allowing the alignment of images with complex spatial or temporal variations. This paper introduces NODEO-LDDMM and NODEO-PDE-LDDMM, two innovative deep-learning-based approaches that bridge the gap between Large Deformation Diffeomorphic Metric Mapping (LDDMM) and neural ordinary differential equations (NODEs). LDDMM and PDE-LDDMM offer mathematically well-established formulations for diffeomorphic registration, while NODEs provide the flexibility of deep-learning in the solution of the ODEs involved in both methods. Both NODEO-LDDMM and NODEO-PDE-LDDMM include the strengths of deep-learning into LDDMM, enabling a robust optimization with a good balance between accuracy and transformation smoothness in their solutions. Our proposed methods reached or outperformed their traditional counterparts and the nearly diffeomorphic deep-learning-based approaches selected as benchmarks. This work contributes to advancing non-rigid image registration techniques, with a methodology suited to overcome some of the limitations of deep-learning in medical image registration.</div></div>","PeriodicalId":48907,"journal":{"name":"Journal of Computational Science","volume":"85 ","pages":"Article 102507"},"PeriodicalIF":3.1000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computational Science","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1877750324003004","RegionNum":3,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0
Abstract
Non-rigid image registration is a crucial task in various medical applications, allowing the alignment of images with complex spatial or temporal variations. This paper introduces NODEO-LDDMM and NODEO-PDE-LDDMM, two innovative deep-learning-based approaches that bridge the gap between Large Deformation Diffeomorphic Metric Mapping (LDDMM) and neural ordinary differential equations (NODEs). LDDMM and PDE-LDDMM offer mathematically well-established formulations for diffeomorphic registration, while NODEs provide the flexibility of deep-learning in the solution of the ODEs involved in both methods. Both NODEO-LDDMM and NODEO-PDE-LDDMM include the strengths of deep-learning into LDDMM, enabling a robust optimization with a good balance between accuracy and transformation smoothness in their solutions. Our proposed methods reached or outperformed their traditional counterparts and the nearly diffeomorphic deep-learning-based approaches selected as benchmarks. This work contributes to advancing non-rigid image registration techniques, with a methodology suited to overcome some of the limitations of deep-learning in medical image registration.
期刊介绍:
Computational Science is a rapidly growing multi- and interdisciplinary field that uses advanced computing and data analysis to understand and solve complex problems. It has reached a level of predictive capability that now firmly complements the traditional pillars of experimentation and theory.
The recent advances in experimental techniques such as detectors, on-line sensor networks and high-resolution imaging techniques, have opened up new windows into physical and biological processes at many levels of detail. The resulting data explosion allows for detailed data driven modeling and simulation.
This new discipline in science combines computational thinking, modern computational methods, devices and collateral technologies to address problems far beyond the scope of traditional numerical methods.
Computational science typically unifies three distinct elements:
• Modeling, Algorithms and Simulations (e.g. numerical and non-numerical, discrete and continuous);
• Software developed to solve science (e.g., biological, physical, and social), engineering, medicine, and humanities problems;
• Computer and information science that develops and optimizes the advanced system hardware, software, networking, and data management components (e.g. problem solving environments).