Fully automated segmentation of brain and scalp blood vessels on multi-parametric magnetic resonance imaging using multi-view cascaded networks

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Songxiong Wu , Zilong Huang , Mingyu Wang , Ping Zeng , Biwen Tan , Panying Wang , Bin Huang , Naiwen Zhang , Nashan Wu , Ruodai Wu , Yong Chen , Guangyao Wu , Fuyong Chen , Jian Zhang , Bingsheng Huang
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引用次数: 0

Abstract

Background and Objective

Neurosurgical navigation is a critical element of brain surgery, and accurate segmentation of brain and scalp blood vessels is crucial for surgical planning and treatment. However, conventional methods for segmenting blood vessels based on statistical or thresholding techniques have limitations. In recent years, deep learning-based methods have emerged as a promising solution for blood vessel segmentation, but the segmentation of small blood vessels and scalp blood vessels remains challenging. This study aimed to explore a solution to overcoming the challenges.

Methods

This study proposes a multi-view cascaded deep learning network (MVPCNet) that combines multiple refinements, including multi-view learning, multi-parameter input, and a multi-view ensemble module. We evaluated the proposed method on a dataset of 155 patients, which included annotations for brain and scalp blood vessels. Five-fold cross-validation was conducted on the dataset to assess the performance of the network.

Results

Ablation experiments showed that the proposed refinements in MVPCNet significantly improved the segmentation of small blood and low-contrast vessel performance, which segmented scalp blood vessels from the original images, increasing the Dice and the 95 % Hausdorf distance (HD), from 0.865 to 0.922 and from 1.28 mm to 0.47 mm, respectively, compared to the baseline model.

Conclusions

The proposed method in this study provided a fully automated and accurate segmentation of brain and scalp blood vessels, which is essential for neurosurgical navigation and has potential for clinical applications.
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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