{"title":"An AG-RetinaNet for Embryonic Blastomeres Detection and Counting","authors":"Wenju Zhou, Ouafa Talha, Xiaofei Han, Qiang Liu, Yuan Xu, Zhenbo Zhang, Naitong Yuan","doi":"10.1002/ima.70034","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Embryo morphology assessment is crucial for determining embryo viability in assisted reproductive technology. Traditional manual evaluation, while currently the primary method, is time-consuming, resource-intensive, and prone to inconsistencies due to the complex analysis of morphological parameters such as cell shape, size, and blastomere count. For rapid and accurate recognition and quantification of blastomeres in embryo images, Attention Gated-RetinaNet (AG-RetinaNet) model is proposed in this article. AG-RetinaNet combines an attention block between the backbone network and the Feature Pyramid Network to overcome the difficulties posed by overlapping blastomeres and morphological changes in embryo shape. The proposed model, trained on a dataset of human embryo images at different cell stages, uses ResNet50 and ResNet101 as backbones for performance comparison. Experimental results demonstrate its competitive performance against state-of-the-art detection models, achieving 95.8% average precision while balancing detection accuracy and computational efficiency. Specifically, the AG-RetinaNet achieves 83.08% precision, 91.13% sensitivity, 90.91% specificity, and an F1-score of 86.92% under optimized Intersection Over Union and confidence thresholds, effectively detecting and counting blastomeres across various grades. The comparison between these results and the manual annotations of embryologists confirms that our model has the potential to improve and streamline the workflow of embryologists in clinical practice.</p>\n </div>","PeriodicalId":14027,"journal":{"name":"International Journal of Imaging Systems and Technology","volume":"35 1","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Imaging Systems and Technology","FirstCategoryId":"94","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/ima.70034","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 0
Abstract
Embryo morphology assessment is crucial for determining embryo viability in assisted reproductive technology. Traditional manual evaluation, while currently the primary method, is time-consuming, resource-intensive, and prone to inconsistencies due to the complex analysis of morphological parameters such as cell shape, size, and blastomere count. For rapid and accurate recognition and quantification of blastomeres in embryo images, Attention Gated-RetinaNet (AG-RetinaNet) model is proposed in this article. AG-RetinaNet combines an attention block between the backbone network and the Feature Pyramid Network to overcome the difficulties posed by overlapping blastomeres and morphological changes in embryo shape. The proposed model, trained on a dataset of human embryo images at different cell stages, uses ResNet50 and ResNet101 as backbones for performance comparison. Experimental results demonstrate its competitive performance against state-of-the-art detection models, achieving 95.8% average precision while balancing detection accuracy and computational efficiency. Specifically, the AG-RetinaNet achieves 83.08% precision, 91.13% sensitivity, 90.91% specificity, and an F1-score of 86.92% under optimized Intersection Over Union and confidence thresholds, effectively detecting and counting blastomeres across various grades. The comparison between these results and the manual annotations of embryologists confirms that our model has the potential to improve and streamline the workflow of embryologists in clinical practice.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.