String searching with mismatches using AVX2 and AVX-512 instructions

IF 0.7 4区计算机科学 Q4 COMPUTER SCIENCE, INFORMATION SYSTEMS

Information Processing Letters Pub Date : 2025-01-13 DOI:10.1016/j.ipl.2025.106557

Tamanna Chhabra , Sukhpal Singh Ghuman , Jorma Tarhio

引用次数: 0

Abstract

We present new algorithms for the k mismatches version of approximate string matching. Our algorithms utilize the SIMD (Single Instruction Multiple Data) instruction set extensions, particularly AVX2 and AVX-512 instructions. Our approach is an extension of an earlier algorithm for exact string matching with SSE2 and AVX2. In addition, we modify this exact string matching algorithm to work with AVX-512. We demonstrate the competitiveness of our solutions by practical experiments. Our algorithms outperform earlier algorithms for both exact and approximate string matching on various benchmark data sets.

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来源期刊

Information Processing Letters 工程技术-计算机：信息系统

CiteScore

1.80

自引率

0.00%

发文量

审稿时长

7.3 months

期刊介绍： Information Processing Letters invites submission of original research articles that focus on fundamental aspects of information processing and computing. This naturally includes work in the broadly understood field of theoretical computer science; although papers in all areas of scientific inquiry will be given consideration, provided that they describe research contributions credibly motivated by applications to computing and involve rigorous methodology. High quality experimental papers that address topics of sufficiently broad interest may also be considered. Since its inception in 1971, Information Processing Letters has served as a forum for timely dissemination of short, concise and focused research contributions. Continuing with this tradition, and to expedite the reviewing process, manuscripts are generally limited in length to nine pages when they appear in print.