Sequence-based identification of polyamine oxidase genes in Sorghum bicolor L.

IF 2.3 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Genome Pub Date : 2025-01-01 DOI:10.1139/gen-2024-0143
Heba T Ebeed, Mohamed El-Zonkorany, Eman Habib, Esraa Ali, Ahmed Zahran, Aya Hamdy Ragab
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引用次数: 0

Abstract

Polyamine oxidases (PAOs) are enzymes associated with polyamine catabolism and play important roles in growth and development and stress tolerance of plants. In the present study, genome-wide discovery and analysis of the PAO family in sorghum was done utilizing model PAO of Arabidopsis. Six PAO genes were found using publicly available genomic data. Sorghum has the PAO gene representatives distributed throughout four chromosomes (chr1, chr3, chr6, and chr7), and most members have eight to nine exons. The molecular weights of PAO proteins range from 53 to 63 kDa. PAO proteins have a theoretical PI between 5.2 and 8.1. The identification and characterization of PAO gene members in sorghum lay the foundation for further experimental studies elucidating their roles in growth, development, and stress responses, ultimately contributing to our understanding of plant biology, with significant implications for plant breeding by providing valuable insights into potential targets for enhancing stress tolerance and improving crop performance.

高粱多胺氧化酶基因的序列鉴定。
多胺氧化酶(Polyamine oxidase, PAOs)是与植物多胺分解代谢有关的酶,在植物的生长发育和抗逆性中起着重要作用。本研究利用拟南芥PAO模型,对高粱PAO家族进行了全基因组发现和分析。利用公开的基因组数据发现了6个PAO基因。PAO基因代表分布在高粱的4条染色体(chr1、3、6和7)中,大多数成员有8 - 9个外显子。PAO蛋白分子量在53 ~ 63 kDa之间。PAO蛋白的理论PI在5.2和8.1之间。高粱PAO基因成员的鉴定和鉴定为进一步的实验研究奠定了基础,阐明了它们在生长、发育和胁迫反应中的作用,最终有助于我们对植物生物学的理解,并为植物育种提供了有价值的见解,从而提高作物的耐受性和提高作物性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Genome
Genome 生物-生物工程与应用微生物
CiteScore
5.30
自引率
3.20%
发文量
42
审稿时长
6-12 weeks
期刊介绍: Genome is a monthly journal, established in 1959, that publishes original research articles, reviews, mini-reviews, current opinions, and commentaries. Areas of interest include general genetics and genomics, cytogenetics, molecular and evolutionary genetics, developmental genetics, population genetics, phylogenomics, molecular identification, as well as emerging areas such as ecological, comparative, and functional genomics.
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