Restoration of G to A mutated transcripts using the MS2-ADAR1 system.

4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology
Methods in enzymology Pub Date : 2025-01-01 Epub Date: 2024-12-05 DOI:10.1016/bs.mie.2024.11.031
Sonali Bhakta, Toshifumi Tsukahara
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引用次数: 0

Abstract

Site-directed RNA editing (SDRE) holds significant promise for treating genetic disorders resulting from point mutations. Gene therapy, for common genetic illnesses is becoming more popular and, although viable treatments for genetic disorders are scarce, stop codon mutation-related conditions may benefit from gene editing. Effective SDRE generally depends on introducing many guideRNA molecules relative to the target gene; however, large ratios cannot be achieved in the context of gene therapy applications. Gene-encoded information can be altered, and functionally diverse proteins produced from a single gene by restoration of point-mutated RNA molecules using SDRE. Adenosine deaminase acting on RNA (ADAR) is an RNA-editing enzyme, that can specifically convert adenosine (A) residues to inosines (I), which are translated as guanosine (G). MS2 system along with ADAR1 deaminase domain can target a particular A and repair G to A mutations. In this study, we used the RNA binding MS2 coat protein fused with the ADAR1 deaminase domain controlled by the CMV promoter, and a 19 bp guide RNA (complementary to the target mRNA sequence) engineered with 6 × MS2 stem-loops downstream or 1 × MS2 stem-loop (double MS2) on either side, controlled by the U6 promoter. When the EGFP TGG codon (tryptophan) was altered to an amber (TAG), opal (TGA), or ochre (TAA) stop codon, the modified ADAR1 deaminase domain could convert A-to-I (G) at the edited sites. It is anticipated that successful establishment of this technique will result in a new era in gene therapy, allowing remarkably efficient gene repair, even in vivo.

利用MS2-ADAR1系统恢复G到A突变转录本。
位点定向RNA编辑(SDRE)在治疗由点突变引起的遗传疾病方面具有重要的前景。针对常见遗传疾病的基因治疗正变得越来越流行,尽管针对遗传疾病的可行治疗方法很少,但与密码子突变相关的疾病可能会从基因编辑中受益。有效的SDRE通常依赖于引入许多与靶基因相关的引导rna分子;然而,在基因治疗应用的背景下,无法实现大比例。通过使用SDRE修复点突变RNA分子,可以改变基因编码信息,并从单个基因产生功能多样的蛋白质。ADAR (Adenosine deaminase acting on RNA)是一种RNA编辑酶,可以特异性地将腺苷(A)残基转化为肌苷(I),肌苷(I)被翻译为鸟苷(G)。MS2系统与ADAR1脱氨酶结构域可以靶向特定的A并修复G到A的突变。在本研究中,我们使用了结合MS2外壳蛋白的RNA与CMV启动子控制的ADAR1脱氨酶结构域融合,以及由U6启动子控制的下游6 × MS2茎环或两侧1 × MS2茎环(双MS2)工程的19 bp引导RNA(与目标mRNA序列互补)。当EGFP TGG密码子(色氨酸)被改变为琥珀色(TAG)、蛋白色(TGA)或赭色(TAA)停止密码子时,修饰后的ADAR1脱氨酶结构域可以在编辑位点将a转化为i (G)。预计这项技术的成功建立将导致基因治疗的新时代,甚至可以在体内进行非常有效的基因修复。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Methods in enzymology
Methods in enzymology 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
308
审稿时长
3-6 weeks
期刊介绍: The critically acclaimed laboratory standard for almost 50 years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Each volume is eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 500 volumes the series contains much material still relevant today and is truly an essential publication for researchers in all fields of life sciences, including microbiology, biochemistry, cancer research and genetics-just to name a few. Five of the 2013 Nobel Laureates have edited or contributed to volumes of MIE.
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