A Generalized Method for the Estimation of the Intensity of Electron-Phonon Interaction in Photosynthetic Pigments using the Evolutionary Optimization Algorithm

IF 1.4 4区 化学 Q4 PHYSICS, ATOMIC, MOLECULAR & CHEMICAL
V. A. Kurkov, D. D. Chesalin, A. P. Razjivin, U. A. Shkirina, R. Y. Pishchalnikov
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Abstract

Modeling the optical response of photosynthetic pigments is an integral part of the study of fundamental physical processes of interaction between multi-atomic molecules and the external electromagnetic field. In contrast to ab initio methods for calculating the ground and excited states of a molecule, the use of semiclassical quantum theories allows us to use characteristic functions, such as spectral density, to calculate absorption spectra rather than considering the full set of electron and atom configurations. The main disadvantage of this approach is the comparison of calculated and experimental spectra and, as a consequence, the need to justify the uniqueness of the obtained parameters of the system under study and to evaluate their statistical significance. In order to improve the quality of the optical response calculation, a heuristic evolutionary optimization algorithm was used in this work, which minimizes the difference between the measured and theoretical spectra by determining the most appropriate set of model parameters. It is shown that, using as an example the spectra of photosynthetic pigments measured in different solvents, the optimization of modeling allowed us to obtain a good agreement between the calculated and experimental data and to unambiguously determine the electron-phonon interaction coefficients for the electronic excited states of chlorophyll, lutein and β-carotene.

Abstract Image

利用进化优化算法估计光合色素中电子-声子相互作用强度的广义方法
光合色素的光学响应建模是研究多原子分子与外界电磁场相互作用的基本物理过程的重要组成部分。与从头计算分子的基态和激发态的方法相比,使用半经典量子理论允许我们使用特征函数,如谱密度,来计算吸收光谱,而不是考虑一整套电子和原子构型。这种方法的主要缺点是计算光谱和实验光谱的比较,因此,需要证明所获得的系统参数的唯一性,并评估其统计显著性。为了提高光响应计算的质量,本文采用启发式进化优化算法,通过确定最合适的模型参数集,使实测光谱与理论光谱之间的差异最小化。结果表明,以在不同溶剂中测量的光合色素光谱为例,优化的模型使我们能够获得计算数据和实验数据之间的良好一致性,并明确地确定叶绿素、叶黄素和β-胡萝卜素的电子激发态的电子-声子相互作用系数。
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来源期刊
Russian Journal of Physical Chemistry B
Russian Journal of Physical Chemistry B 化学-物理:原子、分子和化学物理
CiteScore
2.20
自引率
71.40%
发文量
106
审稿时长
4-8 weeks
期刊介绍: Russian Journal of Physical Chemistry B: Focus on Physics is a journal that publishes studies in the following areas: elementary physical and chemical processes; structure of chemical compounds, reactivity, effect of external field and environment on chemical transformations; molecular dynamics and molecular organization; dynamics and kinetics of photoand radiation-induced processes; mechanism of chemical reactions in gas and condensed phases and at interfaces; chain and thermal processes of ignition, combustion and detonation in gases, two-phase and condensed systems; shock waves; new physical methods of examining chemical reactions; and biological processes in chemical physics.
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