Deep learning generalization for diabetic retinopathy staging from fundus images.

IF 2.3 4区 医学 Q3 BIOPHYSICS
Yevgeniy Men, Jonathan Fhima, Leo Anthony Celi, Lucas Zago Ribeiro, Luis Filipe Nakayama, Joachim A Behar
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引用次数: 0

Abstract

Objective. Diabetic retinopathy (DR) is a serious diabetes complication that can lead to vision loss, making timely identification crucial. Existing data-driven algorithms for DR staging from digital fundus images (DFIs) often struggle with generalization due to distribution shifts between training and target domains.Approach. To address this, DRStageNet, a deep learning model, was developed using six public and independent datasets with 91 984 DFIs from diverse demographics. Five pretrained self-supervised vision transformers (ViTs) were benchmarked, with the best further trained using a multi-source domain (MSD) fine-tuning strategy.Main results. DINOv2 showed a 27.4% improvement in L-Kappa versus other pretrained ViT. MSD fine-tuning improved performance in four of five target domains. The error analysis revealing 60% of errors due to incorrect labels, 77.5% of which were correctly classified by DRStageNet.Significance. We developed DRStageNet, a DL model for DR, designed to accurately stage the condition while addressing the challenge of generalizing performance across target domains. The model and explainability heatmaps are available atwww.aimlab-technion.com/lirot-ai.

基于眼底图像的糖尿病视网膜病变分期的深度学习泛化。
糖尿病视网膜病变(DR)是一种严重的糖尿病并发症,可导致视力丧失,因此及时识别至关重要。现有的基于数字眼底图像(dfi)的DR分期数据驱动算法由于训练域和目标域之间的分布变化而难以泛化。为了解决这个问题,DRStageNet是一个深度学习模型,它使用了来自不同人口统计数据的91,984个dfi的六个公共和独立数据集。对5个预训练的自监督视觉变压器(vit)进行了基准测试,并使用多源域微调策略对最佳视觉变压器进行了进一步训练。与其他预训练的ViT相比,DINOv2的L-Kappa改善了27.4%。多源域微调提高了五个目标域中的四个的性能。错误分析显示,60%的错误是由于不正确的标签,其中77.5%的错误被DRStageNet正确分类。模型和可解释性热图可在[手稿接受后的URL]获得。
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来源期刊
Physiological measurement
Physiological measurement 生物-工程:生物医学
CiteScore
5.50
自引率
9.40%
发文量
124
审稿时长
3 months
期刊介绍: Physiological Measurement publishes papers about the quantitative assessment and visualization of physiological function in clinical research and practice, with an emphasis on the development of new methods of measurement and their validation. Papers are published on topics including: applied physiology in illness and health electrical bioimpedance, optical and acoustic measurement techniques advanced methods of time series and other data analysis biomedical and clinical engineering in-patient and ambulatory monitoring point-of-care technologies novel clinical measurements of cardiovascular, neurological, and musculoskeletal systems. measurements in molecular, cellular and organ physiology and electrophysiology physiological modeling and simulation novel biomedical sensors, instruments, devices and systems measurement standards and guidelines.
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