Causal inference between immune cells and glioblastoma: a bidirectional Mendelian randomization study.

IF 3.3 3区 医学 Q2 ONCOLOGY
Shiqiang Hou, Chunjing Jin, Beitian Shi, Yinan Chen, Ning Lin
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Abstract

Background: Glioblastoma (GBM) and immunology are closely related, but its mechanism remains unclear. This study aimed to observe the causal inference between GBM and various immune cells by bidirectional Mendelian randomization (MR) analysis. Methods: We used immune cell and GBM data from the GWAS database. A total of 731 immunophenotypes, including four trait types and seven panels. For bidirectional MR analysis, Inverse Variance Weighted and False Discovery Rate (FDR) were both employed. Sensitivity analysis was also performed to make sure the results were reliable. Results: According to FDR, seven immunophenotypes associated with GBM risk: CD33br HLA DR+ AC (FDR = 0.009), CD38 on PB/PC (FDR = 0.046), CD66b on CD66b++ myeloid cell (FDR = 0.019), CD3 on CD39+ resting Treg (FDR = 0.009), HVEM on CM CD8br (FDR = 0.050), CD45 on CD33br HLA DR+ CD14dim (FDR = 0.027), and CD86 on CD62L+ myeloid DC (FDR = 0.048). In reverse MR analysis, GBM was found to be strongly associated with nine immunophenotypes based on FDR: BAFF-R on CD24+ CD27+ (FDR = 0.033), BAFF-R on IgD+ CD38- (FDR = 0.036), BAFF-R on IgD-CD38br (FDR = 0.039), BAFF-R on unsw mem (FDR = 0.048), BAFF-R on CD20- (FDR=0.012), HVEM on EM CD8br (FDR=0.036), CCR2 on myeloid DC (FDR = 0.035), CD45 on CD33-HLA DR+ (FDR = 0.004), and CD34 on HSC (FDR = 0.035). Conclusion: The current study confirmed the causal inference between 16 different immunophenotypes and GBM using genetic tools, providing an important foundation and guide for future immunological research and immunotherapy of GBM.

免疫细胞与胶质母细胞瘤之间的因果关系:一项双向孟德尔随机研究。
背景:胶质母细胞瘤(GBM)与免疫学密切相关,但其发病机制尚不清楚。本研究旨在通过双向孟德尔随机化(MR)分析,观察GBM与多种免疫细胞之间的因果关系。方法:我们使用来自GWAS数据库的免疫细胞和GBM数据。共有731个免疫表型,包括4个性状型和7个面板。双向磁共振分析采用方差逆加权和错误发现率(FDR)。同时进行敏感性分析以确保结果的可靠性。结果:根据FDR,有7种免疫表型与GBM风险相关:CD33br HLA DR+ AC (FDR = 0.009)、CD38在PB/PC (FDR = 0.046)、CD66b在CD66b++髓样细胞(FDR = 0.019)、CD3在CD39+ resting Treg (FDR = 0.009)、HVEM在CM CD8br (FDR = 0.050)、CD45在CD33br HLA DR+ CD14dim (FDR = 0.027)、CD86在CD62L+髓样DC (FDR = 0.048)。在反向MR分析中,发现GBM与基于FDR的9种免疫表型密切相关:BAFF-R在CD24+ CD27+ (FDR= 0.033)、BAFF-R在IgD+ CD38- (FDR=0.036)、BAFF-R在IgD- cd38br (FDR= 0.039)、BAFF-R在unsw mem (FDR= 0.048)、BAFF-R在CD20- (FDR=0.012)、HVEM在EM CD8br (FDR=0.036)、CCR2在髓系DC (FDR= 0.035)、CD45在CD33-HLA DR+ (FDR= 0.004)、CD34在HSC (FDR= 0.035)。结论:本研究利用遗传学工具证实了16种不同免疫表型与GBM之间的因果关系,为今后GBM的免疫学研究和免疫治疗提供了重要的基础和指导。
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来源期刊
Journal of Cancer
Journal of Cancer ONCOLOGY-
CiteScore
8.10
自引率
2.60%
发文量
333
审稿时长
12 weeks
期刊介绍: Journal of Cancer is an open access, peer-reviewed journal with broad scope covering all areas of cancer research, especially novel concepts, new methods, new regimens, new therapeutic agents, and alternative approaches for early detection and intervention of cancer. The Journal is supported by an international editorial board consisting of a distinguished team of cancer researchers. Journal of Cancer aims at rapid publication of high quality results in cancer research while maintaining rigorous peer-review process.
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