Prognostic and immunological role of LASP2 in clear cell renal cell carcinoma.

IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Libo Chen, Nanhui Chen, Zhouzhou Xie, Yuchen Xiao, Huiming Jiang
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引用次数: 0

Abstract

Background: Clear cell renal cell carcinoma (ccRCC) represents a common renal carcinoma subtype influenced by the immune microenvironment. LIM and SH3 Protein 2 (LASP2), an actin-binding protein within the nebulin family, contributes to cellular immunity and adhesion mechanisms.

Objective: This study aimed to clarify the immunological and prognostic relevance of LASP2 in ccRCC.

Methods: Using clinical and expression data from TCGA, LASP2 expression levels were analyzed alongside clinicopathological features in ccRCC patients. Validation was conducted through real-world samples and tissue microarrays. Comprehensive analysis using online databases examined genetic mutations, DNA methylation patterns, and immune microenvironment characteristics. Gene set enrichment analysis (GSEA) provided insights into LASP2's potential mechanisms in ccRCC.

Results: LASP2 expression was notably reduced and correlated with adverse clinicopathological features and prognosis in ccRCC patients. Prognostic associations were identified across multiple CpG DNA methylation sites. LASP2 levels showed significant correlations with immune cell infiltration and checkpoint genes, including PDCD1 and CTLA4. GSEA findings highlighted LASP2's enrichment within metabolic pathways and signaling networks, such as fatty acid metabolism, TGF-β signaling, and epithelial-mesenchymal transition.

Conclusion: LASP2 emerged as an immune-associated biomarker linked to poorer survival outcomes in ccRCC, suggesting its potential as a novel anti-cancer target and prognostic indicator in ccRCC.

LASP2在透明细胞肾细胞癌中的预后和免疫学作用。
背景:透明细胞肾细胞癌(ccRCC)是一种受免疫微环境影响的常见肾癌亚型。LIM和SH3蛋白2 (LASP2)是星云蛋白家族中的一种肌动蛋白结合蛋白,参与细胞免疫和粘附机制。目的:本研究旨在阐明LASP2在ccRCC中的免疫学和预后相关性。方法:利用TCGA的临床和表达数据,分析LASP2在ccRCC患者中的表达水平和临床病理特征。通过真实世界样品和组织微阵列进行验证。利用在线数据库进行综合分析,检查了基因突变、DNA甲基化模式和免疫微环境特征。基因集富集分析(GSEA)揭示了LASP2在ccRCC中的潜在机制。结果:LASP2在ccRCC患者中表达明显降低,并与不良临床病理特征及预后相关。预后关联在多个CpG DNA甲基化位点被确定。LASP2水平与免疫细胞浸润和检查点基因(包括PDCD1和CTLA4)有显著相关性。GSEA的研究结果强调了LASP2在代谢途径和信号网络中的富集,如脂肪酸代谢、TGF-β信号传导和上皮-间质转化。结论:LASP2作为一种免疫相关的生物标志物与ccRCC较差的生存结果相关,提示其作为ccRCC新的抗癌靶点和预后指标的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Genes & genomics
Genes & genomics 生物-生化与分子生物学
CiteScore
3.70
自引率
4.80%
发文量
131
审稿时长
6-12 weeks
期刊介绍: Genes & Genomics is an official journal of the Korean Genetics Society (http://kgenetics.or.kr/). Although it is an official publication of the Genetics Society of Korea, membership of the Society is not required for contributors. It is a peer-reviewed international journal publishing print (ISSN 1976-9571) and online version (E-ISSN 2092-9293). It covers all disciplines of genetics and genomics from prokaryotes to eukaryotes from fundamental heredity to molecular aspects. The articles can be reviews, research articles, and short communications.
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