Ahmad Saeed Hessen, Nahed Mahmood Ahmed Alsultany, Hala Bahir, A Husein Adthab, Somayeh Soleimani-Amiri, Sheida Ahmadi, Esmail Vessally, Azadeh Khanmohammadi
{"title":"Adsorption of sulfur mustard on the transition metals (TM = Ti<sup>2+</sup>, Cr<sup>2+</sup>, Fe<sup>2+,</sup> Co<sup>2+</sup>, Ni<sup>2+</sup>, Cu<sup>2+</sup>, Zn<sup>2+</sup>) porphyrins induced in carbon nanocone (TM-PCNC): Insight from DFT calculation.","authors":"Ahmad Saeed Hessen, Nahed Mahmood Ahmed Alsultany, Hala Bahir, A Husein Adthab, Somayeh Soleimani-Amiri, Sheida Ahmadi, Esmail Vessally, Azadeh Khanmohammadi","doi":"10.1016/j.jmgm.2024.108928","DOIUrl":null,"url":null,"abstract":"<p><p>The density functional theory (DFT) method is applied to investigate the ability of transition metals porphyrins induced in carbon nanocone (TM-PCNC, TM = Ti<sup>2+</sup>, Cr<sup>2+</sup>, Fe<sup>2+</sup>, Co<sup>2+</sup>, Ni<sup>2+</sup>, Cu<sup>2+</sup>, and Zn<sup>2+</sup>) for identifying and eliminating undesirable SM molecules from the surrounding. The sulfur mustard is effectively adsorbed onto the surface of nanocones through a chemical process. Based on the DFT calculations, the Ti-PCNC displays an appropriate percentage change in energy gap (%ΔE<sub>g</sub> = 11.82 and 14.67), thus making it a promising candidate for possessing sensing capabilities towards the sulfur mustard. According to the acquired findings, it can be deduced that the work function of nanocones exhibits minimal alterations after the adsorption of sulfur mustard. This signifies that nanocones may not serve as a suitable work function sensor for sulfur mustard detection. In addition, when the UV-visible spectra of pristine Ti-PCNC are compared with its complexes, it is found that sulfur mustard adsorption does not change the nanocones spectra but increases the number of absorption lines.</p>","PeriodicalId":16361,"journal":{"name":"Journal of molecular graphics & modelling","volume":"135 ","pages":"108928"},"PeriodicalIF":2.7000,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of molecular graphics & modelling","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.jmgm.2024.108928","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
The density functional theory (DFT) method is applied to investigate the ability of transition metals porphyrins induced in carbon nanocone (TM-PCNC, TM = Ti2+, Cr2+, Fe2+, Co2+, Ni2+, Cu2+, and Zn2+) for identifying and eliminating undesirable SM molecules from the surrounding. The sulfur mustard is effectively adsorbed onto the surface of nanocones through a chemical process. Based on the DFT calculations, the Ti-PCNC displays an appropriate percentage change in energy gap (%ΔEg = 11.82 and 14.67), thus making it a promising candidate for possessing sensing capabilities towards the sulfur mustard. According to the acquired findings, it can be deduced that the work function of nanocones exhibits minimal alterations after the adsorption of sulfur mustard. This signifies that nanocones may not serve as a suitable work function sensor for sulfur mustard detection. In addition, when the UV-visible spectra of pristine Ti-PCNC are compared with its complexes, it is found that sulfur mustard adsorption does not change the nanocones spectra but increases the number of absorption lines.
期刊介绍:
The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design.
As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.