Genetically Modifying the Protein Matrix of Macroscopic Living Materials to Control Their Structure and Rheological Properties.

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
ACS Synthetic Biology Pub Date : 2024-12-20 Epub Date: 2024-11-27 DOI:10.1021/acssynbio.4c00336
Esther M Jimenez, Carlson Nguyen, Ahmad Shakeel, Robert Tesoriero, Marimikel Charrier, Alanna Stull, Caroline M Ajo-Franklin
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引用次数: 0

Abstract

The field of engineering living materials (ELMs) seeks to engineer cells to form macroscopic materials with tailorable structures and properties. While the rheological properties of ELMs have been altered using synthetic biology methodology, the relationships connecting their sequence, structural, and rheological properties remain to be elucidated. Recently, our lab created centimeter-scale ELMs from Caulobacter crescentus that offer a platform to investigate this paradigm. Here, we explore how changing the elastin-like polypeptide (ELP) length within the protein matrix of this ELM impacts its microstructure and viscoelastic behavior. We demonstrate that shortening ELP produces fibers almost 2× thicker than other variants, resulting in a stiffer material at rest. Interestingly, the midlength ELP forms a complex structure with globules and multidirectional fibers with increased yield stress under flow conditions. Lengthening ELP creates thinner strands between cells with similar storage and loss moduli to those of the midlength ELP. This study begins to elucidate sequence-structure-property relationships in these ELMs and shows that they are complex with few parallels to other biocomposite models. Furthermore, it highlights that fine-tuning genetic sequences can create significant differences in rheological properties, uncovering new design principles of ELMs.

基因修饰宏观生命材料的蛋白质基质,控制其结构和流变特性。
工程活体材料(ELMs)领域旨在通过工程细胞形成具有可定制结构和特性的宏观材料。虽然利用合成生物学方法改变了 ELMs 的流变特性,但其序列、结构和流变特性之间的关系仍有待阐明。最近,我们实验室从新月芽孢杆菌(Caulobacter crescentus)中创造出了厘米级的 ELM,为研究这一范例提供了一个平台。在这里,我们探讨了改变这种 ELM 蛋白基质中弹性蛋白样多肽(ELP)的长度如何影响其微观结构和粘弹性行为。我们证明,缩短 ELP 产生的纤维几乎比其他变体粗 2 倍,从而使材料在静止时更加坚硬。有趣的是,中间长度的 ELP 在流动条件下会形成具有球状和多向纤维的复杂结构,屈服应力也会增加。延长 ELP 会在细胞之间形成更细的股,其存储和损耗模量与中长 ELP 相似。这项研究开始阐明这些 ELM 的序列-结构-性能关系,并表明它们非常复杂,与其他生物复合材料模型几乎没有相似之处。此外,它还强调了微调基因序列可在流变特性方面产生显著差异,从而揭示 ELM 的新设计原则。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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