Emma De Clerck, Dávid D.Kovács, Katja Berger, Martin Schlerf, Jochem Verrelst
{"title":"Optimizing hybrid models for canopy nitrogen mapping from Sentinel-2 in Google Earth Engine","authors":"Emma De Clerck, Dávid D.Kovács, Katja Berger, Martin Schlerf, Jochem Verrelst","doi":"10.1016/j.isprsjprs.2024.11.005","DOIUrl":null,"url":null,"abstract":"Canopy nitrogen content (CNC) is a crucial variable for plant health, influencing photosynthesis and growth. An optimized, scalable approach for spatially explicit CNC quantification using Sentinel-2 (S2) data is presented, integrating PROSAIL-PRO simulations with Gaussian Process Regression (GPR) and an Active Learning technique, specifically the Euclidean distance-based diversity (EBD) approach for selective sampling. This hybrid method enhances training dataset efficiency and optimizes CNC models for practical applications. Two GPR models based on PROSAIL-PRO variables were evaluated: a protein-based model (C<mml:math altimg=\"si77.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:mtext>prot</mml:mtext></mml:mrow></mml:msub></mml:math>-LAI) and a chlorophyll-based model (C<mml:math altimg=\"si76.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:mtext>ab</mml:mtext></mml:mrow></mml:msub></mml:math>-LAI). Both models, implemented in Google Earth Engine (GEE), demonstrated strong performance and outperformed other machine learning methods, including kernel ridge regression, principal component regression, neural network, weighted k-nearest neighbors regression, partial least squares regression and least squares linear regression. Validation results showed moderate to good accuracies: NRMSE<mml:math altimg=\"si3.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:msub><mml:mrow><mml:mi>C</mml:mi></mml:mrow><mml:mrow><mml:mtext>prot</mml:mtext><mml:mo>−</mml:mo><mml:mtext>LAI</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:msub></mml:math> = 16.76%, R<mml:math altimg=\"si4.svg\" display=\"inline\"><mml:msubsup><mml:mrow></mml:mrow><mml:mrow><mml:msub><mml:mrow><mml:mi>C</mml:mi></mml:mrow><mml:mrow><mml:mtext>prot</mml:mtext><mml:mo>−</mml:mo><mml:mtext>LAI</mml:mtext></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow></mml:msubsup></mml:math> = 0.47; NRMSE<mml:math altimg=\"si5.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:msub><mml:mrow><mml:mi>C</mml:mi></mml:mrow><mml:mrow><mml:mtext>ab</mml:mtext><mml:mo>−</mml:mo><mml:mtext>LAI</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:msub></mml:math> = 18.74%, R<mml:math altimg=\"si6.svg\" display=\"inline\"><mml:msubsup><mml:mrow></mml:mrow><mml:mrow><mml:msub><mml:mrow><mml:mi>C</mml:mi></mml:mrow><mml:mrow><mml:mtext>ab</mml:mtext><mml:mo>−</mml:mo><mml:mtext>LAI</mml:mtext></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow></mml:msubsup></mml:math> = 0.51. The models revealed high consistency for an independent validation dataset of the Munich-North-Isar (Germany) test site, with R<mml:math altimg=\"si132.svg\" display=\"inline\"><mml:msup><mml:mrow></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow></mml:msup></mml:math> values of 0.58 and 0.71 and NRMSEs of 21.47% and 20.17% for the C<mml:math altimg=\"si77.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:mtext>prot</mml:mtext></mml:mrow></mml:msub></mml:math>-LAI model and C<mml:math altimg=\"si76.svg\" display=\"inline\"><mml:msub><mml:mrow></mml:mrow><mml:mrow><mml:mtext>ab</mml:mtext></mml:mrow></mml:msub></mml:math>-LAI model, respectively. The models also demonstrated high consistency across growing seasons, indicating their potential for time series analysis of CNC dynamics. Application of the S2-based mapping workflow across the Iberian Peninsula, with estimates showing relative uncertainty below 30%, highlights the model’s broad applicability and portability. The optimized EBD-GPR-CNC approach within GEE supports scalable CNC estimation and offers a robust tool for monitoring nitrogen dynamics.","PeriodicalId":50269,"journal":{"name":"ISPRS Journal of Photogrammetry and Remote Sensing","volume":"236 1","pages":""},"PeriodicalIF":10.6000,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ISPRS Journal of Photogrammetry and Remote Sensing","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1016/j.isprsjprs.2024.11.005","RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"GEOGRAPHY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Canopy nitrogen content (CNC) is a crucial variable for plant health, influencing photosynthesis and growth. An optimized, scalable approach for spatially explicit CNC quantification using Sentinel-2 (S2) data is presented, integrating PROSAIL-PRO simulations with Gaussian Process Regression (GPR) and an Active Learning technique, specifically the Euclidean distance-based diversity (EBD) approach for selective sampling. This hybrid method enhances training dataset efficiency and optimizes CNC models for practical applications. Two GPR models based on PROSAIL-PRO variables were evaluated: a protein-based model (Cprot-LAI) and a chlorophyll-based model (Cab-LAI). Both models, implemented in Google Earth Engine (GEE), demonstrated strong performance and outperformed other machine learning methods, including kernel ridge regression, principal component regression, neural network, weighted k-nearest neighbors regression, partial least squares regression and least squares linear regression. Validation results showed moderate to good accuracies: NRMSECprot−LAI = 16.76%, RCprot−LAI2 = 0.47; NRMSECab−LAI = 18.74%, RCab−LAI2 = 0.51. The models revealed high consistency for an independent validation dataset of the Munich-North-Isar (Germany) test site, with R2 values of 0.58 and 0.71 and NRMSEs of 21.47% and 20.17% for the Cprot-LAI model and Cab-LAI model, respectively. The models also demonstrated high consistency across growing seasons, indicating their potential for time series analysis of CNC dynamics. Application of the S2-based mapping workflow across the Iberian Peninsula, with estimates showing relative uncertainty below 30%, highlights the model’s broad applicability and portability. The optimized EBD-GPR-CNC approach within GEE supports scalable CNC estimation and offers a robust tool for monitoring nitrogen dynamics.
期刊介绍:
The ISPRS Journal of Photogrammetry and Remote Sensing (P&RS) serves as the official journal of the International Society for Photogrammetry and Remote Sensing (ISPRS). It acts as a platform for scientists and professionals worldwide who are involved in various disciplines that utilize photogrammetry, remote sensing, spatial information systems, computer vision, and related fields. The journal aims to facilitate communication and dissemination of advancements in these disciplines, while also acting as a comprehensive source of reference and archive.
P&RS endeavors to publish high-quality, peer-reviewed research papers that are preferably original and have not been published before. These papers can cover scientific/research, technological development, or application/practical aspects. Additionally, the journal welcomes papers that are based on presentations from ISPRS meetings, as long as they are considered significant contributions to the aforementioned fields.
In particular, P&RS encourages the submission of papers that are of broad scientific interest, showcase innovative applications (especially in emerging fields), have an interdisciplinary focus, discuss topics that have received limited attention in P&RS or related journals, or explore new directions in scientific or professional realms. It is preferred that theoretical papers include practical applications, while papers focusing on systems and applications should include a theoretical background.